Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 SDT1YGL224C 843 nt2.42□□□□□ -2.02
TY1B-HO13535 VMA22YHR060W 546 nt2.42□□□□□ -2.02
TY1B-HO13535 HPA2YPR193C 471 nt2.42□□□□□ -2.02
TY1B-HO13535 CDC60YPL160W 3273 nt2.42□□□□□ -2.02
TY1B-HO13535 PAC1YOR269W 1485 nt2.42□□□□□ -2.02
TY1B-HO13535 TMA22YJR014W 597 nt2.41□□□□□ -2.02
TY1B-HO13535 YJR111CYJR111C 852 nt2.41□□□□□ -2.02
TY1B-HO13535 TPP1YMR156C 717 nt2.41□□□□□ -2.02
TY1B-HO13535 FAR11YNL127W 2862 nt2.41□□□□□ -2.02
TY1B-HO13535 ROY1YMR258C 1662 nt2.41□□□□□ -2.02
TY1B-HO13535 SWC4YGR002C 1431 nt2.41□□□□□ -2.02
TY1B-HO13535 YNL144CYNL144C 2223 nt2.41□□□□□ -2.02
TY1B-HO13535 COG4YPR105C 2586 nt2.41□□□□□ -2.02
TY1B-HO13535 WBP1YEL002C 1293 nt2.41□□□□□ -2.02
TY1B-HO13535 CDC123YLR215C 1083 nt2.41□□□□□ -2.02
TY1B-HO13535 MEC1YBR136W 7107 nt2.4□□□□□ -2.02
TY1B-HO13535 PFD1YJL179W 330 nt2.4□□□□□ -2.03
TY1B-HO13535 YJR023CYJR023C 402 nt2.4□□□□□ -2.03
TY1B-HO13535 DID4YKL002W 699 nt2.4□□□□□ -2.03
TY1B-HO13535 DAD2YKR083C 402 nt2.4□□□□□ -2.03
TY1B-HO13535 DSE3YOR264W 1293 nt2.4□□□□□ -2.03
TY1B-HO13535 DAD3YBR233W-A 285 nt2.4□□□□□ -2.03
TY1B-HO13535 HSL1YKL101W 4557 nt2.4□□□□□ -2.03
TY1B-HO13535 GEA2YEL022W 4380 nt2.39□□□□□ -2.03
TY1B-HO13535 COS12YGL263W 1143 nt2.39□□□□□ -2.03
TY1B-HO13535 HHF2YNL030W 312 nt2.39□□□□□ -2.03
TY1B-HO13535 SET4YJL105W 1683 nt2.39□□□□□ -2.03
TY1B-HO13535 TOM70YNL121C 1854 nt2.39□□□□□ -2.03
TY1B-HO13535 FIN1YDR130C 876 nt2.38□□□□□ -2.03
TY1B-HO13535 HMO1YDR174W 741 nt2.38□□□□□ -2.03
TY1B-HO13535 COG1YGL223C 1254 nt2.38□□□□□ -2.03
TY1B-HO13535 PHS1YJL097W 654 nt2.38□□□□□ -2.03
TY1B-HO13535 SPO20YMR017W 1194 nt2.38□□□□□ -2.03
TY1B-HO13535 RPS30BYOR182C 192 nt2.38□□□□□ -2.03
TY1B-HO13535 SSF1YHR066W 1362 nt2.38□□□□□ -2.03
TY1B-HO13535 SOK2YMR016C 2358 nt2.38□□□□□ -2.03
TY1B-HO13535 TOR2YKL203C 7425 nt2.38□□□□□ -2.03
TY1B-HO13535 NDJ1YOL104C 1059 nt2.38□□□□□ -2.03
TY1B-HO13535 YGL176CYGL176C 1665 nt2.37□□□□□ -2.03
TY1B-HO13535 YDR261W-BYDR261W-B 5313 nt2.37□□□□□ -2.03
TY1B-HO13535 DNF3YMR162C 4971 nt2.37□□□□□ -2.03
TY1B-HO13535 CPR5YDR304C 678 nt2.37□□□□□ -2.03
TY1B-HO13535 YOR146WYOR146W 306 nt2.37□□□□□ -2.03
TY1B-HO13535 NDC80YIL144W 2076 nt2.37□□□□□ -2.03
TY1B-HO13535 IOC4YMR044W 1428 nt2.37□□□□□ -2.03
TY1B-HO13535 RRI1YDL216C 1323 nt2.36□□□□□ -2.03
TY1B-HO13535 UBC6YER100W 753 nt2.36□□□□□ -2.03
TY1B-HO13535 ENV10YLR065C 546 nt2.36□□□□□ -2.03
TY1B-HO13535 CDA2YLR308W 939 nt2.36□□□□□ -2.03
TY1B-HO13535 YLR419WYLR419W 4308 nt2.36□□□□□ -2.03
TY1B-HO13535 SEC15YGL233W 2733 nt2.36□□□□□ -2.03
TY1B-HO13535 UTP25YIL091C 2166 nt2.36□□□□□ -2.03
TY1B-HO13535 AIM23YJL131C 1071 nt2.36□□□□□ -2.03
TY1B-HO13535 YDR210W-BYDR210W-B 5313 nt2.35□□□□□ -2.03
TY1B-HO13535 PAU2YEL049W 363 nt2.35□□□□□ -2.03
TY1B-HO13535 PAU12YGR294W 363 nt2.35□□□□□ -2.03
TY1B-HO13535 PAU18YLL064C 363 nt2.35□□□□□ -2.03
TY1B-HO13535 PDR8YLR266C 2106 nt2.35□□□□□ -2.03
TY1B-HO13535 PAU6YNR076W 363 nt2.35□□□□□ -2.03
TY1B-HO13535 PAU24YBR301W 363 nt2.35□□□□□ -2.03
TY1B-HO13535 RNY1YPL123C 1305 nt2.34□□□□□ -2.03
TY1B-HO13535 YLR416CYLR416C 399 nt2.34□□□□□ -2.03
TY1B-HO13535 VPS3YDR495C 3036 nt2.34□□□□□ -2.03
TY1B-HO13535 PHO2YDL106C 1680 nt2.33□□□□□ -2.04
TY1B-HO13535 MED2YDL005C 1296 nt2.33□□□□□ -2.04
TY1B-HO13535 MRPL33YMR286W 261 nt2.33□□□□□ -2.04
TY1B-HO13535 MSH5YDL154W 2706 nt2.33□□□□□ -2.04
TY1B-HO13535 TRZ1YKR079C 2517 nt2.33□□□□□ -2.04
TY1B-HO13535 TRA1YHR099W 11235 nt2.33□□□□□ -2.04
TY1B-HO13535 VBA4YDR119W 2307 nt2.33□□□□□ -2.04
TY1B-HO13535 RPL1BYGL135W 654 nt2.33□□□□□ -2.04
TY1B-HO13535 RPS1AYLR441C 768 nt2.33□□□□□ -2.04
TY1B-HO13535 RPL20AYMR242C 519 nt2.33□□□□□ -2.04
TY1B-HO13535 RPL1AYPL220W 654 nt2.33□□□□□ -2.04
TY1B-HO13535 CIK1YMR198W 1785 nt2.33□□□□□ -2.04
TY1B-HO13535 YPK3YBR028C 1578 nt2.33□□□□□ -2.04
TY1B-HO13535 UTP21YLR409C 2820 nt2.32□□□□□ -2.04
TY1B-HO13535 UIP3YAR027W 708 nt2.32□□□□□ -2.04
TY1B-HO13535 BUR2YLR226W 1188 nt2.32□□□□□ -2.04
TY1B-HO13535 AEP2YMR282C 1743 nt2.32□□□□□ -2.04
TY1B-HO13535 ALG8YOR067C 1734 nt2.32□□□□□ -2.04
TY1B-HO13535 HUA2YOR284W 732 nt2.32□□□□□ -2.04
TY1B-HO13535 HFM1YGL251C 3564 nt2.32□□□□□ -2.04
TY1B-HO13535 MDM10YAL010C 1482 nt2.32□□□□□ -2.04
TY1B-HO13535 DSE4YNR067C 3354 nt2.31□□□□□ -2.04
TY1B-HO13535 FMC1YIL098C 468 nt2.31□□□□□ -2.04
TY1B-HO13535 HHF1YBR009C 312 nt2.31□□□□□ -2.04
TY1B-HO13535 NME1NME1 340 nt2.31□□□□□ -2.04
TY1B-HO13535 HMT1YBR034C 1047 nt2.31□□□□□ -2.04
TY1B-HO13535 NOP14YDL148C 2433 nt2.31□□□□□ -2.04
TY1B-HO13535 SPP382YLR424W 2127 nt2.31□□□□□ -2.04
TY1B-HO13535 NAN1YPL126W 2691 nt2.31□□□□□ -2.04
TY1B-HO13535 TRX1YLR043C 312 nt2.31□□□□□ -2.04
TY1B-HO13535 PRM9YAR031W 897 nt2.31□□□□□ -2.04
TY1B-HO13535 MPD2YOL088C 834 nt2.31□□□□□ -2.04
TY1B-HO13535 CYC2YOR037W 1101 nt2.31□□□□□ -2.04
TY1B-HO13535 YBR238CYBR238C 2196 nt2.3□□□□□ -2.04
TY1B-HO13535 NEM1YHR004C 1341 nt2.3□□□□□ -2.04
TY1B-HO13535 NPL6YMR091C 1308 nt2.3□□□□□ -2.04
TY1B-HO13535 YOL057WYOL057W 2136 nt2.3□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 48.3 ms