Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
PTPN22Q9Y2R2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.13■■■□□ 2.57
PTPN22Q9Y2R2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PTPN22Q9Y2R2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
PTPN22Q9Y2R2 AC108673.1-201ENST00000510422 1159 ntBASIC31.11■■■□□ 2.57
PTPN22Q9Y2R2 MIR6090-201ENST00000622481 60 ntBASIC31.11■■■□□ 2.57
PTPN22Q9Y2R2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.1■■■□□ 2.57
PTPN22Q9Y2R2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PTPN22Q9Y2R2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PTPN22Q9Y2R2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
PTPN22Q9Y2R2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PTPN22Q9Y2R2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.08■■■□□ 2.57
PTPN22Q9Y2R2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PTPN22Q9Y2R2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
PTPN22Q9Y2R2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
PTPN22Q9Y2R2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.04■■■□□ 2.56
PTPN22Q9Y2R2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PTPN22Q9Y2R2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PTPN22Q9Y2R2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
PTPN22Q9Y2R2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PTPN22Q9Y2R2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.02■■■□□ 2.56
PTPN22Q9Y2R2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
PTPN22Q9Y2R2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.99■■■□□ 2.55
PTPN22Q9Y2R2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PTPN22Q9Y2R2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PTPN22Q9Y2R2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
PTPN22Q9Y2R2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
PTPN22Q9Y2R2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.97■■■□□ 2.55
PTPN22Q9Y2R2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.97■■■□□ 2.55
PTPN22Q9Y2R2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
PTPN22Q9Y2R2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.94■■■□□ 2.54
PTPN22Q9Y2R2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
PTPN22Q9Y2R2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.93■■■□□ 2.54
PTPN22Q9Y2R2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
PTPN22Q9Y2R2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
PTPN22Q9Y2R2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
PTPN22Q9Y2R2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.9■■■□□ 2.54
PTPN22Q9Y2R2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
PTPN22Q9Y2R2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
PTPN22Q9Y2R2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PTPN22Q9Y2R2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
PTPN22Q9Y2R2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
PTPN22Q9Y2R2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
PTPN22Q9Y2R2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.89■■■□□ 2.54
PTPN22Q9Y2R2 RARRES2P2-201ENST00000394842 485 ntBASIC30.88■■■□□ 2.53
PTPN22Q9Y2R2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.87■■■□□ 2.53
PTPN22Q9Y2R2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.86■■■□□ 2.53
PTPN22Q9Y2R2 ABHD17AP5-201ENST00000580133 923 ntBASIC30.86■■■□□ 2.53
PTPN22Q9Y2R2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
PTPN22Q9Y2R2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PTPN22Q9Y2R2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PTPN22Q9Y2R2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PTPN22Q9Y2R2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PTPN22Q9Y2R2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.81■■■□□ 2.52
PTPN22Q9Y2R2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.81■■■□□ 2.52
PTPN22Q9Y2R2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.8■■■□□ 2.52
PTPN22Q9Y2R2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
PTPN22Q9Y2R2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.8■■■□□ 2.52
PTPN22Q9Y2R2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PTPN22Q9Y2R2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.79■■■□□ 2.52
PTPN22Q9Y2R2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PTPN22Q9Y2R2 DUX4L13-201ENST00000554103 1267 ntBASIC30.78■■■□□ 2.52
PTPN22Q9Y2R2 DUX4L15-201ENST00000611059 1267 ntBASIC30.78■■■□□ 2.52
PTPN22Q9Y2R2 DUX4L23-201ENST00000615195 1269 ntBASIC30.78■■■□□ 2.52
PTPN22Q9Y2R2 DUX4L24-201ENST00000617576 1269 ntBASIC30.78■■■□□ 2.52
PTPN22Q9Y2R2 DUX4L22-201ENST00000618238 1269 ntBASIC30.78■■■□□ 2.52
PTPN22Q9Y2R2 DUX4L20-201ENST00000619712 1269 ntBASIC30.78■■■□□ 2.52
PTPN22Q9Y2R2 DUX4L21-201ENST00000622058 1269 ntBASIC30.78■■■□□ 2.52
PTPN22Q9Y2R2 DUX4L10-201ENST00000622460 1267 ntBASIC30.78■■■□□ 2.52
PTPN22Q9Y2R2 DUX4L25-201ENST00000624915 1269 ntBASIC30.78■■■□□ 2.52
PTPN22Q9Y2R2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.77■■■□□ 2.52
PTPN22Q9Y2R2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
PTPN22Q9Y2R2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
PTPN22Q9Y2R2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PTPN22Q9Y2R2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PTPN22Q9Y2R2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
PTPN22Q9Y2R2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.76■■■□□ 2.51
PTPN22Q9Y2R2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PTPN22Q9Y2R2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PTPN22Q9Y2R2 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.73■■■□□ 2.51
PTPN22Q9Y2R2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PTPN22Q9Y2R2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PTPN22Q9Y2R2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.72■■■□□ 2.51
PTPN22Q9Y2R2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.72■■■□□ 2.51
PTPN22Q9Y2R2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PTPN22Q9Y2R2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.7■■■□□ 2.51
PTPN22Q9Y2R2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
PTPN22Q9Y2R2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PTPN22Q9Y2R2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.69■■■□□ 2.5
PTPN22Q9Y2R2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PTPN22Q9Y2R2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PTPN22Q9Y2R2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PTPN22Q9Y2R2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PTPN22Q9Y2R2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PTPN22Q9Y2R2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PTPN22Q9Y2R2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PTPN22Q9Y2R2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PTPN22Q9Y2R2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
PTPN22Q9Y2R2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
PTPN22Q9Y2R2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms