Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MACF1Q9UPN3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MACF1Q9UPN3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
MACF1Q9UPN3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC11.63□□□□□ -0.55
MACF1Q9UPN3 RARRES2P1-201ENST00000474487 481 ntBASIC11.63□□□□□ -0.55
MACF1Q9UPN3 LINC01971-201ENST00000617888 1048 ntBASIC11.63□□□□□ -0.55
MACF1Q9UPN3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
MACF1Q9UPN3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
MACF1Q9UPN3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
MACF1Q9UPN3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MACF1Q9UPN3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC11.62□□□□□ -0.55
MACF1Q9UPN3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
MACF1Q9UPN3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC11.61□□□□□ -0.55
MACF1Q9UPN3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
MACF1Q9UPN3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC11.61□□□□□ -0.55
MACF1Q9UPN3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC11.61□□□□□ -0.55
MACF1Q9UPN3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MACF1Q9UPN3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
MACF1Q9UPN3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MACF1Q9UPN3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC11.59□□□□□ -0.55
MACF1Q9UPN3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC11.59□□□□□ -0.55
MACF1Q9UPN3 GFER-205ENST00000569451 517 ntTSL 5 BASIC11.59□□□□□ -0.55
MACF1Q9UPN3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
MACF1Q9UPN3 GPX1-201ENST00000419349 1106 ntBASIC11.58□□□□□ -0.55
MACF1Q9UPN3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC11.58□□□□□ -0.56
MACF1Q9UPN3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC11.58□□□□□ -0.56
MACF1Q9UPN3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
MACF1Q9UPN3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
MACF1Q9UPN3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MACF1Q9UPN3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MACF1Q9UPN3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MACF1Q9UPN3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
MACF1Q9UPN3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC11.57□□□□□ -0.56
MACF1Q9UPN3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC11.57□□□□□ -0.56
MACF1Q9UPN3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MACF1Q9UPN3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC11.57□□□□□ -0.56
MACF1Q9UPN3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC11.57□□□□□ -0.56
MACF1Q9UPN3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MACF1Q9UPN3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
MACF1Q9UPN3 AL451085.2-201ENST00000605085 799 ntBASIC11.56□□□□□ -0.56
MACF1Q9UPN3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MACF1Q9UPN3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
MACF1Q9UPN3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MACF1Q9UPN3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC11.56□□□□□ -0.56
MACF1Q9UPN3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MACF1Q9UPN3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MACF1Q9UPN3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC11.55□□□□□ -0.56
MACF1Q9UPN3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
MACF1Q9UPN3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC11.54□□□□□ -0.56
MACF1Q9UPN3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MACF1Q9UPN3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC11.54□□□□□ -0.56
MACF1Q9UPN3 TSPY13P-201ENST00000338964 914 ntBASIC11.54□□□□□ -0.56
MACF1Q9UPN3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
MACF1Q9UPN3 DUX4L13-201ENST00000554103 1267 ntBASIC11.53□□□□□ -0.56
MACF1Q9UPN3 DUX4L15-201ENST00000611059 1267 ntBASIC11.53□□□□□ -0.56
MACF1Q9UPN3 DUX4L23-201ENST00000615195 1269 ntBASIC11.53□□□□□ -0.56
MACF1Q9UPN3 DUX4L24-201ENST00000617576 1269 ntBASIC11.53□□□□□ -0.56
MACF1Q9UPN3 DUX4L22-201ENST00000618238 1269 ntBASIC11.53□□□□□ -0.56
MACF1Q9UPN3 DUX4L20-201ENST00000619712 1269 ntBASIC11.53□□□□□ -0.56
MACF1Q9UPN3 DUX4L21-201ENST00000622058 1269 ntBASIC11.53□□□□□ -0.56
MACF1Q9UPN3 DUX4L10-201ENST00000622460 1267 ntBASIC11.53□□□□□ -0.56
MACF1Q9UPN3 DUX4L25-201ENST00000624915 1269 ntBASIC11.53□□□□□ -0.56
MACF1Q9UPN3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
MACF1Q9UPN3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
MACF1Q9UPN3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC11.53□□□□□ -0.56
MACF1Q9UPN3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
MACF1Q9UPN3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
MACF1Q9UPN3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC11.52□□□□□ -0.56
MACF1Q9UPN3 AC004987.1-201ENST00000428627 508 ntBASIC11.52□□□□□ -0.57
MACF1Q9UPN3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
MACF1Q9UPN3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC11.52□□□□□ -0.57
MACF1Q9UPN3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MACF1Q9UPN3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MACF1Q9UPN3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MACF1Q9UPN3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC11.51□□□□□ -0.57
MACF1Q9UPN3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MACF1Q9UPN3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MACF1Q9UPN3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MACF1Q9UPN3 AC131212.1-201ENST00000613771 668 ntBASIC11.51□□□□□ -0.57
MACF1Q9UPN3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MACF1Q9UPN3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MACF1Q9UPN3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
MACF1Q9UPN3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
MACF1Q9UPN3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
MACF1Q9UPN3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC11.5□□□□□ -0.57
MACF1Q9UPN3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC11.5□□□□□ -0.57
MACF1Q9UPN3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
MACF1Q9UPN3 HES4-204ENST00000484667 667 ntTSL 3 BASIC11.49□□□□□ -0.57
MACF1Q9UPN3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MACF1Q9UPN3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC11.49□□□□□ -0.57
MACF1Q9UPN3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC11.49□□□□□ -0.57
MACF1Q9UPN3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
MACF1Q9UPN3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
MACF1Q9UPN3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
MACF1Q9UPN3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
MACF1Q9UPN3 HES6-205ENST00000409356 528 ntTSL 2 BASIC11.47□□□□□ -0.57
MACF1Q9UPN3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MACF1Q9UPN3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC11.47□□□□□ -0.57
MACF1Q9UPN3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
MACF1Q9UPN3 AC092666.2-201ENST00000613287 246 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms