Protein–RNA interactions for Protein: Q9H0X6

RNF208, RING finger protein 208, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF208Q9H0X6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
RNF208Q9H0X6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.65■■■□□ 2.5
RNF208Q9H0X6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.65■■■□□ 2.5
RNF208Q9H0X6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RNF208Q9H0X6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RNF208Q9H0X6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.64■■■□□ 2.5
RNF208Q9H0X6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
RNF208Q9H0X6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
RNF208Q9H0X6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.63■■■□□ 2.49
RNF208Q9H0X6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RNF208Q9H0X6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
RNF208Q9H0X6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RNF208Q9H0X6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RNF208Q9H0X6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RNF208Q9H0X6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
RNF208Q9H0X6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RNF208Q9H0X6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.58■■■□□ 2.49
RNF208Q9H0X6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
RNF208Q9H0X6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RNF208Q9H0X6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
RNF208Q9H0X6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
RNF208Q9H0X6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RNF208Q9H0X6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RNF208Q9H0X6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RNF208Q9H0X6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RNF208Q9H0X6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.53■■■□□ 2.48
RNF208Q9H0X6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RNF208Q9H0X6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.52■■■□□ 2.48
RNF208Q9H0X6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RNF208Q9H0X6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
RNF208Q9H0X6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.51■■■□□ 2.47
RNF208Q9H0X6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RNF208Q9H0X6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.49■■■□□ 2.47
RNF208Q9H0X6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.49■■■□□ 2.47
RNF208Q9H0X6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RNF208Q9H0X6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.47■■■□□ 2.47
RNF208Q9H0X6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RNF208Q9H0X6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
RNF208Q9H0X6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.46■■■□□ 2.47
RNF208Q9H0X6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.45■■■□□ 2.47
RNF208Q9H0X6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RNF208Q9H0X6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.44■■■□□ 2.46
RNF208Q9H0X6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RNF208Q9H0X6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RNF208Q9H0X6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
RNF208Q9H0X6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
RNF208Q9H0X6 RARRES2P2-201ENST00000394842 485 ntBASIC30.38■■■□□ 2.45
RNF208Q9H0X6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.38■■■□□ 2.45
RNF208Q9H0X6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
RNF208Q9H0X6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
RNF208Q9H0X6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
RNF208Q9H0X6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RNF208Q9H0X6 DUX4L13-201ENST00000554103 1267 ntBASIC30.35■■■□□ 2.45
RNF208Q9H0X6 DUX4L15-201ENST00000611059 1267 ntBASIC30.35■■■□□ 2.45
RNF208Q9H0X6 DUX4L23-201ENST00000615195 1269 ntBASIC30.35■■■□□ 2.45
RNF208Q9H0X6 DUX4L24-201ENST00000617576 1269 ntBASIC30.35■■■□□ 2.45
RNF208Q9H0X6 DUX4L22-201ENST00000618238 1269 ntBASIC30.35■■■□□ 2.45
RNF208Q9H0X6 DUX4L20-201ENST00000619712 1269 ntBASIC30.35■■■□□ 2.45
RNF208Q9H0X6 DUX4L21-201ENST00000622058 1269 ntBASIC30.35■■■□□ 2.45
RNF208Q9H0X6 DUX4L10-201ENST00000622460 1267 ntBASIC30.35■■■□□ 2.45
RNF208Q9H0X6 DUX4L25-201ENST00000624915 1269 ntBASIC30.35■■■□□ 2.45
RNF208Q9H0X6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
RNF208Q9H0X6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
RNF208Q9H0X6 ABHD17AP5-201ENST00000580133 923 ntBASIC30.34■■■□□ 2.45
RNF208Q9H0X6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RNF208Q9H0X6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.33■■■□□ 2.45
RNF208Q9H0X6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
RNF208Q9H0X6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.33■■■□□ 2.45
RNF208Q9H0X6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RNF208Q9H0X6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RNF208Q9H0X6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RNF208Q9H0X6 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.31■■■□□ 2.44
RNF208Q9H0X6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.31■■■□□ 2.44
RNF208Q9H0X6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RNF208Q9H0X6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RNF208Q9H0X6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
RNF208Q9H0X6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
RNF208Q9H0X6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.29■■■□□ 2.44
RNF208Q9H0X6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.29■■■□□ 2.44
RNF208Q9H0X6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.27■■■□□ 2.44
RNF208Q9H0X6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.27■■■□□ 2.44
RNF208Q9H0X6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.26■■■□□ 2.43
RNF208Q9H0X6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.25■■■□□ 2.43
RNF208Q9H0X6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RNF208Q9H0X6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RNF208Q9H0X6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.24■■■□□ 2.43
RNF208Q9H0X6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RNF208Q9H0X6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RNF208Q9H0X6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RNF208Q9H0X6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
RNF208Q9H0X6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
RNF208Q9H0X6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
RNF208Q9H0X6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RNF208Q9H0X6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.22■■■□□ 2.43
RNF208Q9H0X6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RNF208Q9H0X6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RNF208Q9H0X6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.21■■■□□ 2.43
RNF208Q9H0X6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.21■■■□□ 2.43
RNF208Q9H0X6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.2■■■□□ 2.43
RNF208Q9H0X6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms