Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC14.2□□□□□ -0.14
KRTAP4-1Q9BYQ7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KRTAP4-1Q9BYQ7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRTAP4-1Q9BYQ7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KRTAP4-1Q9BYQ7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC14.19□□□□□ -0.14
KRTAP4-1Q9BYQ7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRTAP4-1Q9BYQ7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRTAP4-1Q9BYQ7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRTAP4-1Q9BYQ7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
KRTAP4-1Q9BYQ7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC14.18□□□□□ -0.14
KRTAP4-1Q9BYQ7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRTAP4-1Q9BYQ7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRTAP4-1Q9BYQ7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC14.17□□□□□ -0.14
KRTAP4-1Q9BYQ7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC14.17□□□□□ -0.14
KRTAP4-1Q9BYQ7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRTAP4-1Q9BYQ7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
KRTAP4-1Q9BYQ7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC14.16□□□□□ -0.14
KRTAP4-1Q9BYQ7 CR559946.2-201ENST00000623684 991 ntBASIC14.16□□□□□ -0.14
KRTAP4-1Q9BYQ7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
KRTAP4-1Q9BYQ7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRTAP4-1Q9BYQ7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRTAP4-1Q9BYQ7 AC108673.1-201ENST00000510422 1159 ntBASIC14.15□□□□□ -0.14
KRTAP4-1Q9BYQ7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC14.15□□□□□ -0.14
KRTAP4-1Q9BYQ7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRTAP4-1Q9BYQ7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRTAP4-1Q9BYQ7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRTAP4-1Q9BYQ7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KRTAP4-1Q9BYQ7 DUX4L11-201ENST00000611504 1267 ntBASIC14.14□□□□□ -0.15
KRTAP4-1Q9BYQ7 DUX4L12-201ENST00000614593 1267 ntBASIC14.14□□□□□ -0.15
KRTAP4-1Q9BYQ7 DUX4L14-201ENST00000621227 1267 ntBASIC14.14□□□□□ -0.15
KRTAP4-1Q9BYQ7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC14.14□□□□□ -0.15
KRTAP4-1Q9BYQ7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRTAP4-1Q9BYQ7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC14.13□□□□□ -0.15
KRTAP4-1Q9BYQ7 HSD17B1P1-201ENST00000590052 955 ntBASIC14.13□□□□□ -0.15
KRTAP4-1Q9BYQ7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC14.13□□□□□ -0.15
KRTAP4-1Q9BYQ7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRTAP4-1Q9BYQ7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
KRTAP4-1Q9BYQ7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRTAP4-1Q9BYQ7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRTAP4-1Q9BYQ7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRTAP4-1Q9BYQ7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC14.12□□□□□ -0.15
KRTAP4-1Q9BYQ7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRTAP4-1Q9BYQ7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC14.11□□□□□ -0.15
KRTAP4-1Q9BYQ7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KRTAP4-1Q9BYQ7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
KRTAP4-1Q9BYQ7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KRTAP4-1Q9BYQ7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC14.11□□□□□ -0.15
KRTAP4-1Q9BYQ7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
KRTAP4-1Q9BYQ7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC14.1□□□□□ -0.15
KRTAP4-1Q9BYQ7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KRTAP4-1Q9BYQ7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
KRTAP4-1Q9BYQ7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRTAP4-1Q9BYQ7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC14.09□□□□□ -0.15
KRTAP4-1Q9BYQ7 LINC01971-201ENST00000617888 1048 ntBASIC14.09□□□□□ -0.15
KRTAP4-1Q9BYQ7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRTAP4-1Q9BYQ7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC14.08□□□□□ -0.16
KRTAP4-1Q9BYQ7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.08□□□□□ -0.16
KRTAP4-1Q9BYQ7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
KRTAP4-1Q9BYQ7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
KRTAP4-1Q9BYQ7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KRTAP4-1Q9BYQ7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KRTAP4-1Q9BYQ7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRTAP4-1Q9BYQ7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC14.06□□□□□ -0.16
KRTAP4-1Q9BYQ7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRTAP4-1Q9BYQ7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRTAP4-1Q9BYQ7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRTAP4-1Q9BYQ7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRTAP4-1Q9BYQ7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRTAP4-1Q9BYQ7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRTAP4-1Q9BYQ7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
KRTAP4-1Q9BYQ7 ABHD17AP3-201ENST00000503096 1137 ntBASIC14.04□□□□□ -0.16
KRTAP4-1Q9BYQ7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
KRTAP4-1Q9BYQ7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KRTAP4-1Q9BYQ7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRTAP4-1Q9BYQ7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRTAP4-1Q9BYQ7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRTAP4-1Q9BYQ7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRTAP4-1Q9BYQ7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC14.03□□□□□ -0.16
KRTAP4-1Q9BYQ7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRTAP4-1Q9BYQ7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRTAP4-1Q9BYQ7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRTAP4-1Q9BYQ7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KRTAP4-1Q9BYQ7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRTAP4-1Q9BYQ7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC14.02□□□□□ -0.17
KRTAP4-1Q9BYQ7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC14.02□□□□□ -0.17
KRTAP4-1Q9BYQ7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRTAP4-1Q9BYQ7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KRTAP4-1Q9BYQ7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRTAP4-1Q9BYQ7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KRTAP4-1Q9BYQ7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC14□□□□□ -0.17
KRTAP4-1Q9BYQ7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14□□□□□ -0.17
KRTAP4-1Q9BYQ7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC13.99□□□□□ -0.17
KRTAP4-1Q9BYQ7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRTAP4-1Q9BYQ7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRTAP4-1Q9BYQ7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
KRTAP4-1Q9BYQ7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC13.98□□□□□ -0.17
KRTAP4-1Q9BYQ7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC13.98□□□□□ -0.17
KRTAP4-1Q9BYQ7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC13.98□□□□□ -0.17
KRTAP4-1Q9BYQ7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRTAP4-1Q9BYQ7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms