Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.06■■□□□ 1.76
CNTNAP3BQ96NU0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.05■■□□□ 1.76
CNTNAP3BQ96NU0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
CNTNAP3BQ96NU0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
CNTNAP3BQ96NU0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
CNTNAP3BQ96NU0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CNTNAP3BQ96NU0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CNTNAP3BQ96NU0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.03■■□□□ 1.76
CNTNAP3BQ96NU0 NTF6A-201ENST00000591175 560 ntBASIC26.02■■□□□ 1.76
CNTNAP3BQ96NU0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CNTNAP3BQ96NU0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.01■■□□□ 1.75
CNTNAP3BQ96NU0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26■■□□□ 1.75
CNTNAP3BQ96NU0 GPX1-201ENST00000419349 1106 ntBASIC25.99■■□□□ 1.75
CNTNAP3BQ96NU0 RNF126P1-201ENST00000567452 1320 ntBASIC25.98■■□□□ 1.75
CNTNAP3BQ96NU0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CNTNAP3BQ96NU0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
CNTNAP3BQ96NU0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CNTNAP3BQ96NU0 AL592295.1-201ENST00000400984 884 ntBASIC25.95■■□□□ 1.74
CNTNAP3BQ96NU0 AL033527.3-201ENST00000566366 1196 ntBASIC25.95■■□□□ 1.74
CNTNAP3BQ96NU0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.95■■□□□ 1.74
CNTNAP3BQ96NU0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
CNTNAP3BQ96NU0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.93■■□□□ 1.74
CNTNAP3BQ96NU0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CNTNAP3BQ96NU0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CNTNAP3BQ96NU0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CNTNAP3BQ96NU0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CNTNAP3BQ96NU0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.92■■□□□ 1.74
CNTNAP3BQ96NU0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CNTNAP3BQ96NU0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CNTNAP3BQ96NU0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.91■■□□□ 1.74
CNTNAP3BQ96NU0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CNTNAP3BQ96NU0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CNTNAP3BQ96NU0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CNTNAP3BQ96NU0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CNTNAP3BQ96NU0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CNTNAP3BQ96NU0 AC008813.1-201ENST00000536597 885 ntBASIC25.9■■□□□ 1.74
CNTNAP3BQ96NU0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CNTNAP3BQ96NU0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CNTNAP3BQ96NU0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CNTNAP3BQ96NU0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CNTNAP3BQ96NU0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CNTNAP3BQ96NU0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CNTNAP3BQ96NU0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.89■■□□□ 1.74
CNTNAP3BQ96NU0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
CNTNAP3BQ96NU0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CNTNAP3BQ96NU0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.87■■□□□ 1.73
CNTNAP3BQ96NU0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CNTNAP3BQ96NU0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CNTNAP3BQ96NU0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
CNTNAP3BQ96NU0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CNTNAP3BQ96NU0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CNTNAP3BQ96NU0 MIR6090-201ENST00000622481 60 ntBASIC25.86■■□□□ 1.73
CNTNAP3BQ96NU0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.85■■□□□ 1.73
CNTNAP3BQ96NU0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CNTNAP3BQ96NU0 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CNTNAP3BQ96NU0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CNTNAP3BQ96NU0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CNTNAP3BQ96NU0 AC108673.1-201ENST00000510422 1159 ntBASIC25.83■■□□□ 1.73
CNTNAP3BQ96NU0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
CNTNAP3BQ96NU0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.82■■□□□ 1.72
CNTNAP3BQ96NU0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CNTNAP3BQ96NU0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CNTNAP3BQ96NU0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.8■■□□□ 1.72
CNTNAP3BQ96NU0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.8■■□□□ 1.72
CNTNAP3BQ96NU0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CNTNAP3BQ96NU0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
CNTNAP3BQ96NU0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CNTNAP3BQ96NU0 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.78■■□□□ 1.72
CNTNAP3BQ96NU0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
CNTNAP3BQ96NU0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CNTNAP3BQ96NU0 MIR935-201ENST00000401179 91 ntBASIC25.77■■□□□ 1.72
CNTNAP3BQ96NU0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.77■■□□□ 1.72
CNTNAP3BQ96NU0 RARRES2P1-201ENST00000474487 481 ntBASIC25.76■■□□□ 1.71
CNTNAP3BQ96NU0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CNTNAP3BQ96NU0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CNTNAP3BQ96NU0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CNTNAP3BQ96NU0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.75■■□□□ 1.71
CNTNAP3BQ96NU0 DUX4L13-201ENST00000554103 1267 ntBASIC25.75■■□□□ 1.71
CNTNAP3BQ96NU0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
CNTNAP3BQ96NU0 DUX4L15-201ENST00000611059 1267 ntBASIC25.75■■□□□ 1.71
CNTNAP3BQ96NU0 DUX4L23-201ENST00000615195 1269 ntBASIC25.75■■□□□ 1.71
CNTNAP3BQ96NU0 DUX4L24-201ENST00000617576 1269 ntBASIC25.75■■□□□ 1.71
CNTNAP3BQ96NU0 DUX4L22-201ENST00000618238 1269 ntBASIC25.75■■□□□ 1.71
CNTNAP3BQ96NU0 DUX4L20-201ENST00000619712 1269 ntBASIC25.75■■□□□ 1.71
CNTNAP3BQ96NU0 DUX4L21-201ENST00000622058 1269 ntBASIC25.75■■□□□ 1.71
CNTNAP3BQ96NU0 DUX4L10-201ENST00000622460 1267 ntBASIC25.75■■□□□ 1.71
CNTNAP3BQ96NU0 DUX4L25-201ENST00000624915 1269 ntBASIC25.75■■□□□ 1.71
CNTNAP3BQ96NU0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CNTNAP3BQ96NU0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.74■■□□□ 1.71
CNTNAP3BQ96NU0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.73■■□□□ 1.71
CNTNAP3BQ96NU0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.73■■□□□ 1.71
CNTNAP3BQ96NU0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.72■■□□□ 1.71
CNTNAP3BQ96NU0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CNTNAP3BQ96NU0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CNTNAP3BQ96NU0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.71■■□□□ 1.71
CNTNAP3BQ96NU0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CNTNAP3BQ96NU0 WASH5P-204ENST00000632292 975 ntBASIC25.7■■□□□ 1.7
CNTNAP3BQ96NU0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CNTNAP3BQ96NU0 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CNTNAP3BQ96NU0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms