Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
LRCH3Q96II8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.6■■■□□ 2.33
LRCH3Q96II8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
LRCH3Q96II8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
LRCH3Q96II8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
LRCH3Q96II8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
LRCH3Q96II8 MIR6090-201ENST00000622481 60 ntBASIC29.58■■■□□ 2.33
LRCH3Q96II8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.58■■■□□ 2.33
LRCH3Q96II8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
LRCH3Q96II8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.57■■■□□ 2.32
LRCH3Q96II8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
LRCH3Q96II8 WASH5P-204ENST00000632292 975 ntBASIC29.55■■■□□ 2.32
LRCH3Q96II8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
LRCH3Q96II8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
LRCH3Q96II8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
LRCH3Q96II8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
LRCH3Q96II8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
LRCH3Q96II8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.53■■■□□ 2.32
LRCH3Q96II8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
LRCH3Q96II8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.53■■■□□ 2.32
LRCH3Q96II8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
LRCH3Q96II8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
LRCH3Q96II8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.5■■■□□ 2.31
LRCH3Q96II8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
LRCH3Q96II8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
LRCH3Q96II8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.48■■■□□ 2.31
LRCH3Q96II8 AC108673.1-201ENST00000510422 1159 ntBASIC29.48■■■□□ 2.31
LRCH3Q96II8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.48■■■□□ 2.31
LRCH3Q96II8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.48■■■□□ 2.31
LRCH3Q96II8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
LRCH3Q96II8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
LRCH3Q96II8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
LRCH3Q96II8 AC012354.3-201ENST00000623734 483 ntBASIC29.45■■■□□ 2.31
LRCH3Q96II8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.44■■■□□ 2.3
LRCH3Q96II8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.44■■■□□ 2.3
LRCH3Q96II8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
LRCH3Q96II8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
LRCH3Q96II8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
LRCH3Q96II8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
LRCH3Q96II8 GPX1-201ENST00000419349 1106 ntBASIC29.42■■■□□ 2.3
LRCH3Q96II8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
LRCH3Q96II8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
LRCH3Q96II8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.4■■■□□ 2.3
LRCH3Q96II8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
LRCH3Q96II8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC29.39■■■□□ 2.3
LRCH3Q96II8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
LRCH3Q96II8 RNF126P1-201ENST00000567452 1320 ntBASIC29.38■■■□□ 2.29
LRCH3Q96II8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
LRCH3Q96II8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.37■■■□□ 2.29
LRCH3Q96II8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
LRCH3Q96II8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
LRCH3Q96II8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
LRCH3Q96II8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
LRCH3Q96II8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.36■■■□□ 2.29
LRCH3Q96II8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
LRCH3Q96II8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
LRCH3Q96II8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
LRCH3Q96II8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
LRCH3Q96II8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
LRCH3Q96II8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC29.36■■■□□ 2.29
LRCH3Q96II8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
LRCH3Q96II8 AC018358.1-201ENST00000631079 1402 ntBASIC29.36■■■□□ 2.29
LRCH3Q96II8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
LRCH3Q96II8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
LRCH3Q96II8 NTF6A-201ENST00000591175 560 ntBASIC29.35■■■□□ 2.29
LRCH3Q96II8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.35■■■□□ 2.29
LRCH3Q96II8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
LRCH3Q96II8 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.32■■■□□ 2.28
LRCH3Q96II8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.32■■■□□ 2.28
LRCH3Q96II8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.31■■■□□ 2.28
LRCH3Q96II8 DUX4L13-201ENST00000554103 1267 ntBASIC29.31■■■□□ 2.28
LRCH3Q96II8 DUX4L15-201ENST00000611059 1267 ntBASIC29.31■■■□□ 2.28
LRCH3Q96II8 DUX4L23-201ENST00000615195 1269 ntBASIC29.31■■■□□ 2.28
LRCH3Q96II8 DUX4L24-201ENST00000617576 1269 ntBASIC29.31■■■□□ 2.28
LRCH3Q96II8 DUX4L22-201ENST00000618238 1269 ntBASIC29.31■■■□□ 2.28
LRCH3Q96II8 DUX4L20-201ENST00000619712 1269 ntBASIC29.31■■■□□ 2.28
LRCH3Q96II8 DUX4L21-201ENST00000622058 1269 ntBASIC29.31■■■□□ 2.28
LRCH3Q96II8 DUX4L10-201ENST00000622460 1267 ntBASIC29.31■■■□□ 2.28
LRCH3Q96II8 DUX4L25-201ENST00000624915 1269 ntBASIC29.31■■■□□ 2.28
LRCH3Q96II8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.31■■■□□ 2.28
LRCH3Q96II8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
LRCH3Q96II8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.3■■■□□ 2.28
LRCH3Q96II8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.29■■■□□ 2.28
LRCH3Q96II8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.29■■■□□ 2.28
LRCH3Q96II8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
LRCH3Q96II8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
LRCH3Q96II8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC29.26■■■□□ 2.27
LRCH3Q96II8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
LRCH3Q96II8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
LRCH3Q96II8 AL033527.3-201ENST00000566366 1196 ntBASIC29.26■■■□□ 2.27
LRCH3Q96II8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
LRCH3Q96II8 AC008813.1-201ENST00000536597 885 ntBASIC29.24■■■□□ 2.27
LRCH3Q96II8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.23■■■□□ 2.27
LRCH3Q96II8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
LRCH3Q96II8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
LRCH3Q96II8 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
LRCH3Q96II8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
LRCH3Q96II8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
LRCH3Q96II8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
LRCH3Q96II8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC29.21■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms