Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.66■■□□□ 1.54
GCN1Q92616 AL033527.3-201ENST00000566366 1196 ntBASIC24.66■■□□□ 1.54
GCN1Q92616 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC24.65■■□□□ 1.54
GCN1Q92616 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.63■■□□□ 1.53
GCN1Q92616 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.63■■□□□ 1.53
GCN1Q92616 GPX1-201ENST00000419349 1106 ntBASIC24.62■■□□□ 1.53
GCN1Q92616 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
GCN1Q92616 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
GCN1Q92616 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
GCN1Q92616 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.59■■□□□ 1.53
GCN1Q92616 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
GCN1Q92616 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC24.59■■□□□ 1.53
GCN1Q92616 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
GCN1Q92616 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
GCN1Q92616 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.58■■□□□ 1.52
GCN1Q92616 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
GCN1Q92616 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
GCN1Q92616 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
GCN1Q92616 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
GCN1Q92616 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
GCN1Q92616 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
GCN1Q92616 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
GCN1Q92616 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
GCN1Q92616 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC24.51■■□□□ 1.51
GCN1Q92616 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
GCN1Q92616 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.51■■□□□ 1.51
GCN1Q92616 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.51■■□□□ 1.51
GCN1Q92616 AC008813.1-201ENST00000536597 885 ntBASIC24.5■■□□□ 1.51
GCN1Q92616 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
GCN1Q92616 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
GCN1Q92616 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
GCN1Q92616 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
GCN1Q92616 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
GCN1Q92616 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
GCN1Q92616 RARRES2P1-201ENST00000474487 481 ntBASIC24.45■■□□□ 1.5
GCN1Q92616 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
GCN1Q92616 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
GCN1Q92616 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.43■■□□□ 1.5
GCN1Q92616 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GCN1Q92616 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
GCN1Q92616 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GCN1Q92616 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
GCN1Q92616 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
GCN1Q92616 DUX4L13-201ENST00000554103 1267 ntBASIC24.41■■□□□ 1.5
GCN1Q92616 DUX4L15-201ENST00000611059 1267 ntBASIC24.41■■□□□ 1.5
GCN1Q92616 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
GCN1Q92616 DUX4L23-201ENST00000615195 1269 ntBASIC24.41■■□□□ 1.5
GCN1Q92616 DUX4L24-201ENST00000617576 1269 ntBASIC24.41■■□□□ 1.5
GCN1Q92616 DUX4L22-201ENST00000618238 1269 ntBASIC24.41■■□□□ 1.5
GCN1Q92616 DUX4L20-201ENST00000619712 1269 ntBASIC24.41■■□□□ 1.5
GCN1Q92616 DUX4L21-201ENST00000622058 1269 ntBASIC24.41■■□□□ 1.5
GCN1Q92616 DUX4L10-201ENST00000622460 1267 ntBASIC24.41■■□□□ 1.5
GCN1Q92616 DUX4L25-201ENST00000624915 1269 ntBASIC24.41■■□□□ 1.5
GCN1Q92616 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
GCN1Q92616 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
GCN1Q92616 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
GCN1Q92616 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.39■■□□□ 1.5
GCN1Q92616 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC24.38■■□□□ 1.49
GCN1Q92616 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
GCN1Q92616 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.38■■□□□ 1.49
GCN1Q92616 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
GCN1Q92616 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.38■■□□□ 1.49
GCN1Q92616 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.38■■□□□ 1.49
GCN1Q92616 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.36■■□□□ 1.49
GCN1Q92616 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.36■■□□□ 1.49
GCN1Q92616 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.35■■□□□ 1.49
GCN1Q92616 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.35■■□□□ 1.49
GCN1Q92616 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
GCN1Q92616 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
GCN1Q92616 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
GCN1Q92616 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
GCN1Q92616 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
GCN1Q92616 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
GCN1Q92616 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
GCN1Q92616 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
GCN1Q92616 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
GCN1Q92616 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
GCN1Q92616 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.33■■□□□ 1.49
GCN1Q92616 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
GCN1Q92616 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.32■■□□□ 1.48
GCN1Q92616 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
GCN1Q92616 AL035685.1-201ENST00000636663 812 ntBASIC24.32■■□□□ 1.48
GCN1Q92616 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
GCN1Q92616 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
GCN1Q92616 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
GCN1Q92616 AC108673.1-201ENST00000510422 1159 ntBASIC24.31■■□□□ 1.48
GCN1Q92616 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
GCN1Q92616 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
GCN1Q92616 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
GCN1Q92616 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
GCN1Q92616 TSPY13P-201ENST00000338964 914 ntBASIC24.29■■□□□ 1.48
GCN1Q92616 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
GCN1Q92616 MIR6090-201ENST00000622481 60 ntBASIC24.28■■□□□ 1.48
GCN1Q92616 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
GCN1Q92616 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.28■■□□□ 1.48
GCN1Q92616 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
GCN1Q92616 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.27■■□□□ 1.48
GCN1Q92616 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.27■■□□□ 1.48
GCN1Q92616 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.26■■□□□ 1.47
GCN1Q92616 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms