Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
COL13A1Q5TAT6 AC008813.1-201ENST00000536597 885 ntBASIC31.82■■■□□ 2.68
COL13A1Q5TAT6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
COL13A1Q5TAT6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.81■■■□□ 2.68
COL13A1Q5TAT6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
COL13A1Q5TAT6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
COL13A1Q5TAT6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
COL13A1Q5TAT6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
COL13A1Q5TAT6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
COL13A1Q5TAT6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.77■■■□□ 2.68
COL13A1Q5TAT6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
COL13A1Q5TAT6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
COL13A1Q5TAT6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.75■■■□□ 2.67
COL13A1Q5TAT6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
COL13A1Q5TAT6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.74■■■□□ 2.67
COL13A1Q5TAT6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
COL13A1Q5TAT6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.71■■■□□ 2.67
COL13A1Q5TAT6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.7■■■□□ 2.67
COL13A1Q5TAT6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.66
COL13A1Q5TAT6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
COL13A1Q5TAT6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.69■■■□□ 2.66
COL13A1Q5TAT6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
COL13A1Q5TAT6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
COL13A1Q5TAT6 RARRES2P1-201ENST00000474487 481 ntBASIC31.68■■■□□ 2.66
COL13A1Q5TAT6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
COL13A1Q5TAT6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
COL13A1Q5TAT6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
COL13A1Q5TAT6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
COL13A1Q5TAT6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
COL13A1Q5TAT6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
COL13A1Q5TAT6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
COL13A1Q5TAT6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.67■■■□□ 2.66
COL13A1Q5TAT6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
COL13A1Q5TAT6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
COL13A1Q5TAT6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
COL13A1Q5TAT6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
COL13A1Q5TAT6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.64■■■□□ 2.66
COL13A1Q5TAT6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
COL13A1Q5TAT6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
COL13A1Q5TAT6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
COL13A1Q5TAT6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
COL13A1Q5TAT6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.62■■■□□ 2.65
COL13A1Q5TAT6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
COL13A1Q5TAT6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
COL13A1Q5TAT6 MIR6090-201ENST00000622481 60 ntBASIC31.57■■■□□ 2.64
COL13A1Q5TAT6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
COL13A1Q5TAT6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.56■■■□□ 2.64
COL13A1Q5TAT6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
COL13A1Q5TAT6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
COL13A1Q5TAT6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
COL13A1Q5TAT6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
COL13A1Q5TAT6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.5■■■□□ 2.63
COL13A1Q5TAT6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
COL13A1Q5TAT6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
COL13A1Q5TAT6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
COL13A1Q5TAT6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
COL13A1Q5TAT6 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.49■■■□□ 2.63
COL13A1Q5TAT6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.49■■■□□ 2.63
COL13A1Q5TAT6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
COL13A1Q5TAT6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
COL13A1Q5TAT6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.48■■■□□ 2.63
COL13A1Q5TAT6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
COL13A1Q5TAT6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.47■■■□□ 2.63
COL13A1Q5TAT6 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.47■■■□□ 2.63
COL13A1Q5TAT6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.47■■■□□ 2.63
COL13A1Q5TAT6 AC108673.1-201ENST00000510422 1159 ntBASIC31.46■■■□□ 2.63
COL13A1Q5TAT6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
COL13A1Q5TAT6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
COL13A1Q5TAT6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.45■■■□□ 2.63
COL13A1Q5TAT6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.45■■■□□ 2.63
COL13A1Q5TAT6 DUX4L13-201ENST00000554103 1267 ntBASIC31.45■■■□□ 2.63
COL13A1Q5TAT6 DUX4L15-201ENST00000611059 1267 ntBASIC31.45■■■□□ 2.63
COL13A1Q5TAT6 DUX4L23-201ENST00000615195 1269 ntBASIC31.45■■■□□ 2.63
COL13A1Q5TAT6 DUX4L24-201ENST00000617576 1269 ntBASIC31.45■■■□□ 2.63
COL13A1Q5TAT6 DUX4L22-201ENST00000618238 1269 ntBASIC31.45■■■□□ 2.63
COL13A1Q5TAT6 DUX4L20-201ENST00000619712 1269 ntBASIC31.45■■■□□ 2.63
COL13A1Q5TAT6 DUX4L21-201ENST00000622058 1269 ntBASIC31.45■■■□□ 2.63
COL13A1Q5TAT6 DUX4L10-201ENST00000622460 1267 ntBASIC31.45■■■□□ 2.63
COL13A1Q5TAT6 DUX4L25-201ENST00000624915 1269 ntBASIC31.45■■■□□ 2.63
COL13A1Q5TAT6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.44■■■□□ 2.62
COL13A1Q5TAT6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.44■■■□□ 2.62
COL13A1Q5TAT6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.44■■■□□ 2.62
COL13A1Q5TAT6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
COL13A1Q5TAT6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.41■■■□□ 2.62
COL13A1Q5TAT6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.4■■■□□ 2.62
COL13A1Q5TAT6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.39■■■□□ 2.62
COL13A1Q5TAT6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.39■■■□□ 2.62
COL13A1Q5TAT6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
COL13A1Q5TAT6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
COL13A1Q5TAT6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
COL13A1Q5TAT6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
COL13A1Q5TAT6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
COL13A1Q5TAT6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.34■■■□□ 2.61
COL13A1Q5TAT6 AL035685.1-201ENST00000636663 812 ntBASIC31.34■■■□□ 2.61
COL13A1Q5TAT6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
COL13A1Q5TAT6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
COL13A1Q5TAT6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
COL13A1Q5TAT6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.31■■■□□ 2.6
COL13A1Q5TAT6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
COL13A1Q5TAT6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms