Protein–RNA interactions for Protein: P23394

PRP28, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, yeastyeast

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP28P23394 SAM1YLR180W 1149 nt8.62□□□□□ -1.03
PRP28P23394 YLR279WYLR279W 390 nt8.61□□□□□ -1.03
PRP28P23394 GNP1YDR508C 1992 nt8.61□□□□□ -1.03
PRP28P23394 SDH5YOL071W 489 nt8.59□□□□□ -1.03
PRP28P23394 YPL251WYPL251W 303 nt8.59□□□□□ -1.03
PRP28P23394 YGR012WYGR012W 1182 nt8.58□□□□□ -1.04
PRP28P23394 YNL024CYNL024C 741 nt8.58□□□□□ -1.04
PRP28P23394 BRR1YPR057W 1026 nt8.58□□□□□ -1.04
PRP28P23394 UFO1YML088W 2007 nt8.58□□□□□ -1.04
PRP28P23394 YOR325WYOR325W 474 nt8.57□□□□□ -1.04
PRP28P23394 ILV3YJR016C 1758 nt8.56□□□□□ -1.04
PRP28P23394 RAD23YEL037C 1197 nt8.56□□□□□ -1.04
PRP28P23394 THI72YOR192C 1800 nt8.56□□□□□ -1.04
PRP28P23394 GLR1YPL091W 1452 nt8.56□□□□□ -1.04
PRP28P23394 TOA2YKL058W 369 nt8.55□□□□□ -1.04
PRP28P23394 FRA1YLL029W 2250 nt8.55□□□□□ -1.04
PRP28P23394 CWC15YDR163W 528 nt8.54□□□□□ -1.04
PRP28P23394 APT2YDR441C 546 nt8.54□□□□□ -1.04
PRP28P23394 YIL100C-AYIL100C-A 339 nt8.54□□□□□ -1.04
PRP28P23394 PET8YNL003C 855 nt8.54□□□□□ -1.04
PRP28P23394 MSB4YOL112W 1479 nt8.53□□□□□ -1.04
PRP28P23394 TRT2tT(CGU)K 72 nt8.53□□□□□ -1.04
PRP28P23394 SBA1YKL117W 651 nt8.53□□□□□ -1.04
PRP28P23394 OYE3YPL171C 1203 nt8.52□□□□□ -1.05
PRP28P23394 YHL008CYHL008C 1884 nt8.51□□□□□ -1.05
PRP28P23394 YMR209CYMR209C 1374 nt8.51□□□□□ -1.05
PRP28P23394 MEP3YPR138C 1470 nt8.51□□□□□ -1.05
PRP28P23394 YLR111WYLR111W 333 nt8.5□□□□□ -1.05
PRP28P23394 FCY21YER060W 1587 nt8.48□□□□□ -1.05
PRP28P23394 YMR226CYMR226C 804 nt8.48□□□□□ -1.05
PRP28P23394 GND2YGR256W 1479 nt8.48□□□□□ -1.05
PRP28P23394 YMR103CYMR103C 363 nt8.47□□□□□ -1.05
PRP28P23394 YPL222C-AYPL222C-A 246 nt8.47□□□□□ -1.05
PRP28P23394 PUS7YOR243C 2031 nt8.47□□□□□ -1.05
PRP28P23394 COQ8YGL119W 1506 nt8.46□□□□□ -1.05
PRP28P23394 UGP1YKL035W 1500 nt8.46□□□□□ -1.05
PRP28P23394 RIB3YDR487C 627 nt8.46□□□□□ -1.06
PRP28P23394 OXA1YER154W 1209 nt8.46□□□□□ -1.06
PRP28P23394 OPI10YOL032W 741 nt8.46□□□□□ -1.06
PRP28P23394 SAM2YDR502C 1155 nt8.45□□□□□ -1.06
PRP28P23394 YJR154WYJR154W 1041 nt8.45□□□□□ -1.06
PRP28P23394 YMR244WYMR244W 1068 nt8.45□□□□□ -1.06
PRP28P23394 SEC61YLR378C 1443 nt8.44□□□□□ -1.06
PRP28P23394 HIS2YFR025C 1008 nt8.43□□□□□ -1.06
PRP28P23394 ARO8YGL202W 1503 nt8.43□□□□□ -1.06
PRP28P23394 CCT2YIL142W 1584 nt8.42□□□□□ -1.06
PRP28P23394 GND1YHR183W 1470 nt8.41□□□□□ -1.06
PRP28P23394 VPS62YGR141W 1404 nt8.4□□□□□ -1.06
PRP28P23394 PHO23YNL097C 993 nt8.4□□□□□ -1.06
PRP28P23394 Q0010Q0010 387 nt8.4□□□□□ -1.06
PRP28P23394 YLR437C-AYLR437C-A 228 nt8.39□□□□□ -1.07
PRP28P23394 KES1YPL145C 1305 nt8.38□□□□□ -1.07
PRP28P23394 SPP2YOR148C 558 nt8.38□□□□□ -1.07
PRP28P23394 RSC8YFR037C 1674 nt8.37□□□□□ -1.07
PRP28P23394 YDL086WYDL086W 822 nt8.37□□□□□ -1.07
PRP28P23394 BET2YPR176C 978 nt8.37□□□□□ -1.07
PRP28P23394 FMS1YMR020W 1527 nt8.37□□□□□ -1.07
PRP28P23394 PSD1YNL169C 1503 nt8.37□□□□□ -1.07
PRP28P23394 YPS3YLR121C 1527 nt8.36□□□□□ -1.07
PRP28P23394 MSC1YML128C 1542 nt8.36□□□□□ -1.07
PRP28P23394 CAB5YDR196C 726 nt8.36□□□□□ -1.07
PRP28P23394 PRY1YJL079C 900 nt8.36□□□□□ -1.07
PRP28P23394 HXK1YFR053C 1458 nt8.36□□□□□ -1.07
PRP28P23394 SGA1YIL099W 1650 nt8.36□□□□□ -1.07
PRP28P23394 LSB6YJL100W 1824 nt8.36□□□□□ -1.07
PRP28P23394 NSG2YNL156C 900 nt8.35□□□□□ -1.07
PRP28P23394 BNI5YNL166C 1347 nt8.34□□□□□ -1.07
PRP28P23394 FLR1YBR008C 1647 nt8.34□□□□□ -1.07
PRP28P23394 YER188WYER188W 720 nt8.34□□□□□ -1.07
PRP28P23394 RBG2YGR173W 1107 nt8.34□□□□□ -1.07
PRP28P23394 DLD2YDL178W 1593 nt8.34□□□□□ -1.07
PRP28P23394 ACH1YBL015W 1581 nt8.34□□□□□ -1.07
PRP28P23394 LOT5YKL183W 921 nt8.33□□□□□ -1.08
PRP28P23394 SMM1YNR015W 1155 nt8.33□□□□□ -1.08
PRP28P23394 CSM1YCR086W 573 nt8.32□□□□□ -1.08
PRP28P23394 YRF1-2YER190W 5046 nt8.32□□□□□ -1.08
PRP28P23394 ALD5YER073W 1563 nt8.31□□□□□ -1.08
PRP28P23394 ZAP1YJL056C 2643 nt8.31□□□□□ -1.08
PRP28P23394 NUC1YJL208C 990 nt8.31□□□□□ -1.08
PRP28P23394 CYT1YOR065W 930 nt8.3□□□□□ -1.08
PRP28P23394 FUB1YCR076C 753 nt8.29□□□□□ -1.08
PRP28P23394 LSB5YCL034W 1065 nt8.29□□□□□ -1.08
PRP28P23394 YLR173WYLR173W 1827 nt8.28□□□□□ -1.08
PRP28P23394 LSB3YFR024C-A 1380 nt8.27□□□□□ -1.09
PRP28P23394 HXT12YIL170W 1374 nt8.27□□□□□ -1.09
PRP28P23394 DIG1YPL049C 1359 nt8.27□□□□□ -1.09
PRP28P23394 YPI1YFR003C 468 nt8.26□□□□□ -1.09
PRP28P23394 OSH7YHR001W 1314 nt8.26□□□□□ -1.09
PRP28P23394 QDR2YIL121W 1629 nt8.25□□□□□ -1.09
PRP28P23394 HEM13YDR044W 987 nt8.25□□□□□ -1.09
PRP28P23394 DMA2YNL116W 1569 nt8.25□□□□□ -1.09
PRP28P23394 RPT5YOR117W 1305 nt8.24□□□□□ -1.09
PRP28P23394 PAU21YOR394W 495 nt8.22□□□□□ -1.09
PRP28P23394 PAU22YPL282C 495 nt8.22□□□□□ -1.09
PRP28P23394 SAM3YPL274W 1764 nt8.22□□□□□ -1.09
PRP28P23394 YJL118WYJL118W 660 nt8.21□□□□□ -1.1
PRP28P23394 RAS2YNL098C 969 nt8.21□□□□□ -1.1
PRP28P23394 YHR218WYHR218W 1812 nt8.21□□□□□ -1.1
PRP28P23394 VRG4YGL225W 1014 nt8.2□□□□□ -1.1
PRP28P23394 MTO1YGL236C 2010 nt8.19□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 8.5 ms