Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.58■■■□□ 2.01
SHISA7A6NL88 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
SHISA7A6NL88 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
SHISA7A6NL88 AC108673.1-201ENST00000510422 1159 ntBASIC27.57■■■□□ 2
SHISA7A6NL88 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SHISA7A6NL88 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SHISA7A6NL88 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.56■■■□□ 2
SHISA7A6NL88 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.56■■■□□ 2
SHISA7A6NL88 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.55■■■□□ 2
SHISA7A6NL88 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SHISA7A6NL88 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
SHISA7A6NL88 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
SHISA7A6NL88 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.53■■■□□ 2
SHISA7A6NL88 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.53■■■□□ 2
SHISA7A6NL88 CR559946.2-201ENST00000623684 991 ntBASIC27.53■■■□□ 2
SHISA7A6NL88 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.52■■■□□ 2
SHISA7A6NL88 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.52■■■□□ 2
SHISA7A6NL88 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.52■■■□□ 2
SHISA7A6NL88 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.52■■■□□ 2
SHISA7A6NL88 DUX4L11-201ENST00000611504 1267 ntBASIC27.51■■□□□ 1.99
SHISA7A6NL88 DUX4L12-201ENST00000614593 1267 ntBASIC27.51■■□□□ 1.99
SHISA7A6NL88 DUX4L14-201ENST00000621227 1267 ntBASIC27.51■■□□□ 1.99
SHISA7A6NL88 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.51■■□□□ 1.99
SHISA7A6NL88 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
SHISA7A6NL88 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SHISA7A6NL88 HSD17B1P1-201ENST00000590052 955 ntBASIC27.49■■□□□ 1.99
SHISA7A6NL88 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SHISA7A6NL88 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SHISA7A6NL88 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SHISA7A6NL88 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.47■■□□□ 1.99
SHISA7A6NL88 LINC01971-201ENST00000617888 1048 ntBASIC27.47■■□□□ 1.99
SHISA7A6NL88 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SHISA7A6NL88 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.46■■□□□ 1.99
SHISA7A6NL88 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.46■■□□□ 1.99
SHISA7A6NL88 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.46■■□□□ 1.99
SHISA7A6NL88 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
SHISA7A6NL88 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
SHISA7A6NL88 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SHISA7A6NL88 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SHISA7A6NL88 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
SHISA7A6NL88 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SHISA7A6NL88 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.42■■□□□ 1.98
SHISA7A6NL88 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SHISA7A6NL88 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SHISA7A6NL88 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SHISA7A6NL88 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.4■■□□□ 1.98
SHISA7A6NL88 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SHISA7A6NL88 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
SHISA7A6NL88 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
SHISA7A6NL88 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
SHISA7A6NL88 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
SHISA7A6NL88 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SHISA7A6NL88 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.38■■□□□ 1.97
SHISA7A6NL88 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SHISA7A6NL88 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SHISA7A6NL88 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.36■■□□□ 1.97
SHISA7A6NL88 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
SHISA7A6NL88 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SHISA7A6NL88 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.33■■□□□ 1.97
SHISA7A6NL88 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SHISA7A6NL88 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.33■■□□□ 1.97
SHISA7A6NL88 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
SHISA7A6NL88 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SHISA7A6NL88 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.3■■□□□ 1.96
SHISA7A6NL88 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SHISA7A6NL88 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SHISA7A6NL88 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SHISA7A6NL88 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SHISA7A6NL88 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SHISA7A6NL88 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.27■■□□□ 1.96
SHISA7A6NL88 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.27■■□□□ 1.96
SHISA7A6NL88 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHISA7A6NL88 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHISA7A6NL88 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.27■■□□□ 1.96
SHISA7A6NL88 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
SHISA7A6NL88 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SHISA7A6NL88 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SHISA7A6NL88 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.25■■□□□ 1.95
SHISA7A6NL88 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.24■■□□□ 1.95
SHISA7A6NL88 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SHISA7A6NL88 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
SHISA7A6NL88 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SHISA7A6NL88 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SHISA7A6NL88 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SHISA7A6NL88 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SHISA7A6NL88 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SHISA7A6NL88 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
SHISA7A6NL88 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.21■■□□□ 1.95
SHISA7A6NL88 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.21■■□□□ 1.95
SHISA7A6NL88 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.21■■□□□ 1.95
SHISA7A6NL88 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SHISA7A6NL88 DUX4L13-201ENST00000554103 1267 ntBASIC27.2■■□□□ 1.94
SHISA7A6NL88 DUX4L15-201ENST00000611059 1267 ntBASIC27.2■■□□□ 1.94
SHISA7A6NL88 DUX4L23-201ENST00000615195 1269 ntBASIC27.2■■□□□ 1.94
SHISA7A6NL88 DUX4L24-201ENST00000617576 1269 ntBASIC27.2■■□□□ 1.94
SHISA7A6NL88 DUX4L22-201ENST00000618238 1269 ntBASIC27.2■■□□□ 1.94
SHISA7A6NL88 DUX4L20-201ENST00000619712 1269 ntBASIC27.2■■□□□ 1.94
SHISA7A6NL88 DUX4L21-201ENST00000622058 1269 ntBASIC27.2■■□□□ 1.94
SHISA7A6NL88 DUX4L10-201ENST00000622460 1267 ntBASIC27.2■■□□□ 1.94
SHISA7A6NL88 DUX4L25-201ENST00000624915 1269 ntBASIC27.2■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms