Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC40.05■■■■■ 4
HFM1A2PYH4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC40.04■■■■■ 4
HFM1A2PYH4 AC044849.2-201ENST00000606596 710 ntBASIC40.04■■■■■ 4
HFM1A2PYH4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC40.04■■■■■ 4
HFM1A2PYH4 AL161658.1-201ENST00000623641 1967 ntBASIC40.03■■■■■ 4
HFM1A2PYH4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC40.02■■■■■ 4
HFM1A2PYH4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC40.02■■■■■ 4
HFM1A2PYH4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■■ 4
HFM1A2PYH4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC40■■■■□ 3.99
HFM1A2PYH4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC39.99■■■■□ 3.99
HFM1A2PYH4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC39.99■■■■□ 3.99
HFM1A2PYH4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC39.99■■■■□ 3.99
HFM1A2PYH4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC39.99■■■■□ 3.99
HFM1A2PYH4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC39.99■■■■□ 3.99
HFM1A2PYH4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC39.98■■■■□ 3.99
HFM1A2PYH4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC39.97■■■■□ 3.99
HFM1A2PYH4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
HFM1A2PYH4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
HFM1A2PYH4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC39.96■■■■□ 3.99
HFM1A2PYH4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC39.95■■■■□ 3.99
HFM1A2PYH4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC39.95■■■■□ 3.99
HFM1A2PYH4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
HFM1A2PYH4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC39.94■■■■□ 3.98
HFM1A2PYH4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC39.93■■■■□ 3.98
HFM1A2PYH4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC39.92■■■■□ 3.98
HFM1A2PYH4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
HFM1A2PYH4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
HFM1A2PYH4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC39.91■■■■□ 3.98
HFM1A2PYH4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC39.9■■■■□ 3.98
HFM1A2PYH4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
HFM1A2PYH4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.97
HFM1A2PYH4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC39.88■■■■□ 3.97
HFM1A2PYH4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC39.88■■■■□ 3.97
HFM1A2PYH4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.97
HFM1A2PYH4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC39.87■■■■□ 3.97
HFM1A2PYH4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC39.87■■■■□ 3.97
HFM1A2PYH4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC39.87■■■■□ 3.97
HFM1A2PYH4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
HFM1A2PYH4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
HFM1A2PYH4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC39.85■■■■□ 3.97
HFM1A2PYH4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC39.85■■■■□ 3.97
HFM1A2PYH4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC39.84■■■■□ 3.97
HFM1A2PYH4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
HFM1A2PYH4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC39.83■■■■□ 3.97
HFM1A2PYH4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC39.82■■■■□ 3.96
HFM1A2PYH4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC39.81■■■■□ 3.96
HFM1A2PYH4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
HFM1A2PYH4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC39.81■■■■□ 3.96
HFM1A2PYH4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC39.8■■■■□ 3.96
HFM1A2PYH4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC39.79■■■■□ 3.96
HFM1A2PYH4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC39.79■■■■□ 3.96
HFM1A2PYH4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
HFM1A2PYH4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC39.78■■■■□ 3.96
HFM1A2PYH4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
HFM1A2PYH4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC39.75■■■■□ 3.95
HFM1A2PYH4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
HFM1A2PYH4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
HFM1A2PYH4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
HFM1A2PYH4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC39.74■■■■□ 3.95
HFM1A2PYH4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC39.74■■■■□ 3.95
HFM1A2PYH4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC39.74■■■■□ 3.95
HFM1A2PYH4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
HFM1A2PYH4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
HFM1A2PYH4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC39.73■■■■□ 3.95
HFM1A2PYH4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC39.72■■■■□ 3.95
HFM1A2PYH4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC39.71■■■■□ 3.95
HFM1A2PYH4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC39.71■■■■□ 3.95
HFM1A2PYH4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
HFM1A2PYH4 MIR6090-201ENST00000622481 60 ntBASIC39.69■■■■□ 3.94
HFM1A2PYH4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC39.69■■■■□ 3.94
HFM1A2PYH4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC39.68■■■■□ 3.94
HFM1A2PYH4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC39.68■■■■□ 3.94
HFM1A2PYH4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
HFM1A2PYH4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC39.66■■■■□ 3.94
HFM1A2PYH4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC39.66■■■■□ 3.94
HFM1A2PYH4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
HFM1A2PYH4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
HFM1A2PYH4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC39.64■■■■□ 3.94
HFM1A2PYH4 AC108673.1-201ENST00000510422 1159 ntBASIC39.63■■■■□ 3.93
HFM1A2PYH4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC39.62■■■■□ 3.93
HFM1A2PYH4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC39.62■■■■□ 3.93
HFM1A2PYH4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC39.61■■■■□ 3.93
HFM1A2PYH4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC39.61■■■■□ 3.93
HFM1A2PYH4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
HFM1A2PYH4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC39.6■■■■□ 3.93
HFM1A2PYH4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC39.6■■■■□ 3.93
HFM1A2PYH4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC39.59■■■■□ 3.93
HFM1A2PYH4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC39.59■■■■□ 3.93
HFM1A2PYH4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC39.58■■■■□ 3.93
HFM1A2PYH4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC39.58■■■■□ 3.93
HFM1A2PYH4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.93
HFM1A2PYH4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC39.57■■■■□ 3.93
HFM1A2PYH4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC39.57■■■■□ 3.93
HFM1A2PYH4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.93
HFM1A2PYH4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC39.57■■■■□ 3.92
HFM1A2PYH4 AC010864.1-201ENST00000609407 1511 ntBASIC39.56■■■■□ 3.92
HFM1A2PYH4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC39.55■■■■□ 3.92
HFM1A2PYH4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC39.54■■■■□ 3.92
HFM1A2PYH4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
HFM1A2PYH4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms