Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM238LA0A1B0GVL6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM238LA0A1B0GVL6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM238LA0A1B0GVL6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM238LA0A1B0GVL6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM238LA0A1B0GVL6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM238LA0A1B0GVL6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM238LA0A1B0GVL6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM238LA0A1B0GVL6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM238LA0A1B0GVL6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM238LA0A1B0GVL6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TMEM238LA0A1B0GVL6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM238LA0A1B0GVL6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM238LA0A1B0GVL6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM238LA0A1B0GVL6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM238LA0A1B0GVL6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM238LA0A1B0GVL6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM238LA0A1B0GVL6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM238LA0A1B0GVL6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM238LA0A1B0GVL6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM238LA0A1B0GVL6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM238LA0A1B0GVL6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM238LA0A1B0GVL6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TMEM238LA0A1B0GVL6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM238LA0A1B0GVL6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM238LA0A1B0GVL6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM238LA0A1B0GVL6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM238LA0A1B0GVL6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM238LA0A1B0GVL6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TMEM238LA0A1B0GVL6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM238LA0A1B0GVL6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TMEM238LA0A1B0GVL6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM238LA0A1B0GVL6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM238LA0A1B0GVL6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
TMEM238LA0A1B0GVL6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM238LA0A1B0GVL6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM238LA0A1B0GVL6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM238LA0A1B0GVL6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM238LA0A1B0GVL6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM238LA0A1B0GVL6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
TMEM238LA0A1B0GVL6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TMEM238LA0A1B0GVL6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM238LA0A1B0GVL6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM238LA0A1B0GVL6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM238LA0A1B0GVL6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM238LA0A1B0GVL6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.58■□□□□ 0.56
TMEM238LA0A1B0GVL6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM238LA0A1B0GVL6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM238LA0A1B0GVL6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM238LA0A1B0GVL6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TMEM238LA0A1B0GVL6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
TMEM238LA0A1B0GVL6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM238LA0A1B0GVL6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM238LA0A1B0GVL6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM238LA0A1B0GVL6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM238LA0A1B0GVL6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
TMEM238LA0A1B0GVL6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM238LA0A1B0GVL6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM238LA0A1B0GVL6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM238LA0A1B0GVL6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEM238LA0A1B0GVL6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM238LA0A1B0GVL6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM238LA0A1B0GVL6 AC142086.6-201ENST00000621154 1765 ntBASIC18.53■□□□□ 0.56
TMEM238LA0A1B0GVL6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM238LA0A1B0GVL6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM238LA0A1B0GVL6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM238LA0A1B0GVL6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM238LA0A1B0GVL6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM238LA0A1B0GVL6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM238LA0A1B0GVL6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM238LA0A1B0GVL6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM238LA0A1B0GVL6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM238LA0A1B0GVL6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM238LA0A1B0GVL6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM238LA0A1B0GVL6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM238LA0A1B0GVL6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TMEM238LA0A1B0GVL6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM238LA0A1B0GVL6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM238LA0A1B0GVL6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TMEM238LA0A1B0GVL6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM238LA0A1B0GVL6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TMEM238LA0A1B0GVL6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM238LA0A1B0GVL6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM238LA0A1B0GVL6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM238LA0A1B0GVL6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TMEM238LA0A1B0GVL6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM238LA0A1B0GVL6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM238LA0A1B0GVL6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM238LA0A1B0GVL6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.46■□□□□ 0.55
TMEM238LA0A1B0GVL6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.45■□□□□ 0.54
TMEM238LA0A1B0GVL6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.45■□□□□ 0.54
TMEM238LA0A1B0GVL6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM238LA0A1B0GVL6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM238LA0A1B0GVL6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TMEM238LA0A1B0GVL6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM238LA0A1B0GVL6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TMEM238LA0A1B0GVL6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM238LA0A1B0GVL6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM238LA0A1B0GVL6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TMEM238LA0A1B0GVL6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms