Protein–RNA interactions for Protein: A0A0C4DFX4

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 3,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A0C4DFX4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
A0A0C4DFX4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.86■■■□□ 2.21
A0A0C4DFX4 AC012354.3-201ENST00000623734 483 ntBASIC28.86■■■□□ 2.21
A0A0C4DFX4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
A0A0C4DFX4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
A0A0C4DFX4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
A0A0C4DFX4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
A0A0C4DFX4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
A0A0C4DFX4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
A0A0C4DFX4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.8■■■□□ 2.2
A0A0C4DFX4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.79■■■□□ 2.2
A0A0C4DFX4 AL033527.3-201ENST00000566366 1196 ntBASIC28.78■■■□□ 2.2
A0A0C4DFX4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
A0A0C4DFX4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
A0A0C4DFX4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.74■■■□□ 2.19
A0A0C4DFX4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
A0A0C4DFX4 AC008813.1-201ENST00000536597 885 ntBASIC28.73■■■□□ 2.19
A0A0C4DFX4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
A0A0C4DFX4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
A0A0C4DFX4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
A0A0C4DFX4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.72■■■□□ 2.19
A0A0C4DFX4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
A0A0C4DFX4 GPX1-201ENST00000419349 1106 ntBASIC28.71■■■□□ 2.19
A0A0C4DFX4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
A0A0C4DFX4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
A0A0C4DFX4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.68■■■□□ 2.18
A0A0C4DFX4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
A0A0C4DFX4 AL035685.1-201ENST00000636663 812 ntBASIC28.68■■■□□ 2.18
A0A0C4DFX4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
A0A0C4DFX4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.67■■■□□ 2.18
A0A0C4DFX4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
A0A0C4DFX4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
A0A0C4DFX4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
A0A0C4DFX4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
A0A0C4DFX4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
A0A0C4DFX4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.59■■■□□ 2.17
A0A0C4DFX4 RARRES2P1-201ENST00000474487 481 ntBASIC28.58■■■□□ 2.17
A0A0C4DFX4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.58■■■□□ 2.17
A0A0C4DFX4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
A0A0C4DFX4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.56■■■□□ 2.16
A0A0C4DFX4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.56■■■□□ 2.16
A0A0C4DFX4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.55■■■□□ 2.16
A0A0C4DFX4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
A0A0C4DFX4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.55■■■□□ 2.16
A0A0C4DFX4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
A0A0C4DFX4 TSPY13P-201ENST00000338964 914 ntBASIC28.54■■■□□ 2.16
A0A0C4DFX4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
A0A0C4DFX4 DUX4L13-201ENST00000554103 1267 ntBASIC28.54■■■□□ 2.16
A0A0C4DFX4 DUX4L15-201ENST00000611059 1267 ntBASIC28.54■■■□□ 2.16
A0A0C4DFX4 DUX4L23-201ENST00000615195 1269 ntBASIC28.54■■■□□ 2.16
A0A0C4DFX4 DUX4L24-201ENST00000617576 1269 ntBASIC28.54■■■□□ 2.16
A0A0C4DFX4 DUX4L22-201ENST00000618238 1269 ntBASIC28.54■■■□□ 2.16
A0A0C4DFX4 DUX4L20-201ENST00000619712 1269 ntBASIC28.54■■■□□ 2.16
A0A0C4DFX4 DUX4L21-201ENST00000622058 1269 ntBASIC28.54■■■□□ 2.16
A0A0C4DFX4 DUX4L10-201ENST00000622460 1267 ntBASIC28.54■■■□□ 2.16
A0A0C4DFX4 DUX4L25-201ENST00000624915 1269 ntBASIC28.54■■■□□ 2.16
A0A0C4DFX4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
A0A0C4DFX4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.51■■■□□ 2.15
A0A0C4DFX4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
A0A0C4DFX4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
A0A0C4DFX4 MIR6090-201ENST00000622481 60 ntBASIC28.5■■■□□ 2.15
A0A0C4DFX4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
A0A0C4DFX4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
A0A0C4DFX4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
A0A0C4DFX4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
A0A0C4DFX4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
A0A0C4DFX4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
A0A0C4DFX4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
A0A0C4DFX4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
A0A0C4DFX4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
A0A0C4DFX4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
A0A0C4DFX4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
A0A0C4DFX4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
A0A0C4DFX4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.48■■■□□ 2.15
A0A0C4DFX4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.46■■■□□ 2.15
A0A0C4DFX4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.46■■■□□ 2.15
A0A0C4DFX4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.46■■■□□ 2.15
A0A0C4DFX4 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.46■■■□□ 2.15
A0A0C4DFX4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.46■■■□□ 2.15
A0A0C4DFX4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC28.44■■■□□ 2.14
A0A0C4DFX4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
A0A0C4DFX4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.44■■■□□ 2.14
A0A0C4DFX4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.42■■■□□ 2.14
A0A0C4DFX4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
A0A0C4DFX4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
A0A0C4DFX4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
A0A0C4DFX4 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.41■■■□□ 2.14
A0A0C4DFX4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.41■■■□□ 2.14
A0A0C4DFX4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
A0A0C4DFX4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
A0A0C4DFX4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.4■■■□□ 2.14
A0A0C4DFX4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
A0A0C4DFX4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.39■■■□□ 2.14
A0A0C4DFX4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
A0A0C4DFX4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
A0A0C4DFX4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
A0A0C4DFX4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.38■■■□□ 2.13
A0A0C4DFX4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.37■■■□□ 2.13
A0A0C4DFX4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
A0A0C4DFX4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms