Protein–RNA interactions for Protein: Q12392

TY2A-DR1, Transposon Ty2-DR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-DR1Q12392 TRK1YJL129C 3708 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 YBR259WYBR259W 2067 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 RRN6YBL014C 2685 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 MFB1YDR219C 1398 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 AVT5YBL089W 1380 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 LST4YKL176C 2487 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 YDL176WYDL176W 2127 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 HLR1YDR528W 1272 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 TMA20YER007C-A 546 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 AIM11YER093C-A 414 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 YGR073CYGR073C 372 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 COX2Q0250 756 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 AGE2YIL044C 897 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 LSM1YJL124C 519 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 SOP4YJL192C 705 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 YJR112W-AYJR112W-A 330 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 YET1YKL065C 621 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 IDP2YLR174W 1239 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 RPN13YLR421C 471 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 YNL089CYNL089C 477 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 GRE2YOL151W 1029 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 snR17asnR17a 333 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 MBA1YBR185C 837 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 PPZ1YML016C 2079 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 VPS53YJL029C 2469 nt3.42□□□□□ -1.86
TY2A-DR1Q12392 TIF4631YGR162W 2859 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 ABP140YOR239W 1887 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 UBX3YDL091C 1368 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 FMP25YLR077W 1752 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 RAD26YJR035W 3258 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 YDL050CYDL050C 372 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 RPS13YDR064W 456 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 YGR109W-AYGR109W-A 873 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 YGR161W-CYGR161W-C 279 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 YIL082WYIL082W 873 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 DAL2YIR029W 1032 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 IES3YLR052W 753 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 YPT7YML001W 627 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 GPI13YLL031C 3054 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 SEC15YGL233W 2733 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 CIN1YOR349W 3045 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 SLK19YOR195W 2466 nt3.41□□□□□ -1.86
TY2A-DR1Q12392 FAS1YKL182W 6156 nt3.4□□□□□ -1.86
TY2A-DR1Q12392 PEX5YDR244W 1839 nt3.4□□□□□ -1.86
TY2A-DR1Q12392 SRD1YCR018C 666 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 MRPL11YDL202W 750 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 THO1YER063W 657 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 YGL039WYGL039W 1047 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 SAE2YGL175C 1038 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 VMA21YGR105W 234 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 PDX1YGR193C 1233 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 RPL17AYKL180W 555 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 YLR177WYLR177W 1887 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 ECI1YLR284C 843 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 IRC21YMR073C 606 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 MUB1YMR100W 1863 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 UBP8YMR223W 1416 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 MPD2YOL088C 834 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 CHD1YER164W 4407 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 SSM4YIL030C 3960 nt3.4□□□□□ -1.87
TY2A-DR1Q12392 KRE5YOR336W 4098 nt3.39□□□□□ -1.87
TY2A-DR1Q12392 NSA1YGL111W 1392 nt3.39□□□□□ -1.87
TY2A-DR1Q12392 UBP5YER144C 2418 nt3.39□□□□□ -1.87
TY2A-DR1Q12392 CTF13YMR094W 1437 nt3.39□□□□□ -1.87
TY2A-DR1Q12392 snR5snR5 204 nt3.39□□□□□ -1.87
TY2A-DR1Q12392 YCR045W-AYCR045W-A 351 nt3.39□□□□□ -1.87
TY2A-DR1Q12392 PPX1YHR201C 1194 nt3.39□□□□□ -1.87
TY2A-DR1Q12392 VMA5YKL080W 1179 nt3.39□□□□□ -1.87
TY2A-DR1Q12392 YOR283WYOR283W 693 nt3.39□□□□□ -1.87
TY2A-DR1Q12392 YPL088WYPL088W 1029 nt3.39□□□□□ -1.87
TY2A-DR1Q12392 ERG9YHR190W 1335 nt3.39□□□□□ -1.87
TY2A-DR1Q12392 RAD4YER162C 2265 nt3.39□□□□□ -1.87
TY2A-DR1Q12392 PHO81YGR233C 3537 nt3.38□□□□□ -1.87
TY2A-DR1Q12392 BSC1YDL037C 987 nt3.38□□□□□ -1.87
TY2A-DR1Q12392 snR9snR9 187 nt3.38□□□□□ -1.87
TY2A-DR1Q12392 YDR133CYDR133C 336 nt3.38□□□□□ -1.87
TY2A-DR1Q12392 NTF2YER009W 378 nt3.38□□□□□ -1.87
TY2A-DR1Q12392 YKL023C-AYKL023C-A 228 nt3.38□□□□□ -1.87
TY2A-DR1Q12392 RPL15AYLR029C 615 nt3.38□□□□□ -1.87
TY2A-DR1Q12392 GMC2YLR445W 567 nt3.38□□□□□ -1.87
TY2A-DR1Q12392 RIM11YMR139W 1113 nt3.38□□□□□ -1.87
TY2A-DR1Q12392 CSM4YPL200W 471 nt3.38□□□□□ -1.87
TY2A-DR1Q12392 YPR077CYPR077C 372 nt3.38□□□□□ -1.87
TY2A-DR1Q12392 YBR137WYBR137W 540 nt3.38□□□□□ -1.87
TY2A-DR1Q12392 BRE5YNR051C 1548 nt3.38□□□□□ -1.87
TY2A-DR1Q12392 SSE2YBR169C 2082 nt3.37□□□□□ -1.87
TY2A-DR1Q12392 SKN7YHR206W 1869 nt3.37□□□□□ -1.87
TY2A-DR1Q12392 RAD2YGR258C 3096 nt3.37□□□□□ -1.87
TY2A-DR1Q12392 YDR262WYDR262W 819 nt3.37□□□□□ -1.87
TY2A-DR1Q12392 SUP56tL(CAA)A 82 nt3.37□□□□□ -1.87
TY2A-DR1Q12392 SUP53tL(CAA)C 82 nt3.37□□□□□ -1.87
TY2A-DR1Q12392 tL(CAA)DtL(CAA)D 82 nt3.37□□□□□ -1.87
TY2A-DR1Q12392 tL(CAA)G1tL(CAA)G1 82 nt3.37□□□□□ -1.87
TY2A-DR1Q12392 SUP54tL(CAA)G2 82 nt3.37□□□□□ -1.87
TY2A-DR1Q12392 tL(CAA)G3tL(CAA)G3 82 nt3.37□□□□□ -1.87
TY2A-DR1Q12392 tL(CAA)KtL(CAA)K 82 nt3.37□□□□□ -1.87
TY2A-DR1Q12392 tL(CAA)LtL(CAA)L 82 nt3.37□□□□□ -1.87
TY2A-DR1Q12392 tL(CAA)MtL(CAA)M 82 nt3.37□□□□□ -1.87
TY2A-DR1Q12392 tL(CAA)NtL(CAA)N 82 nt3.37□□□□□ -1.87
TY2A-DR1Q12392 BCD1YHR040W 1101 nt3.37□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms