Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 ABP140YOR239W 1887 nt3.43□□□□□ -1.86
TY2A-FP0CX61 FMP25YLR077W 1752 nt3.43□□□□□ -1.86
TY2A-FP0CX61 MPS1YDL028C 2295 nt3.42□□□□□ -1.86
TY2A-FP0CX61 SPT6YGR116W 4356 nt3.42□□□□□ -1.86
TY2A-FP0CX61 YCT1YLL055W 1596 nt3.42□□□□□ -1.86
TY2A-FP0CX61 VAC14YLR386W 2643 nt3.42□□□□□ -1.86
TY2A-FP0CX61 SYT1YPR095C 3681 nt3.42□□□□□ -1.86
TY2A-FP0CX61 YBR259WYBR259W 2067 nt3.42□□□□□ -1.86
TY2A-FP0CX61 RRN6YBL014C 2685 nt3.42□□□□□ -1.86
TY2A-FP0CX61 MFB1YDR219C 1398 nt3.42□□□□□ -1.86
TY2A-FP0CX61 AVT5YBL089W 1380 nt3.42□□□□□ -1.86
TY2A-FP0CX61 LST4YKL176C 2487 nt3.42□□□□□ -1.86
TY2A-FP0CX61 YDL176WYDL176W 2127 nt3.42□□□□□ -1.86
TY2A-FP0CX61 HLR1YDR528W 1272 nt3.42□□□□□ -1.86
TY2A-FP0CX61 TMA20YER007C-A 546 nt3.42□□□□□ -1.86
TY2A-FP0CX61 AIM11YER093C-A 414 nt3.42□□□□□ -1.86
TY2A-FP0CX61 YGR073CYGR073C 372 nt3.42□□□□□ -1.86
TY2A-FP0CX61 COX2Q0250 756 nt3.42□□□□□ -1.86
TY2A-FP0CX61 AGE2YIL044C 897 nt3.42□□□□□ -1.86
TY2A-FP0CX61 LSM1YJL124C 519 nt3.42□□□□□ -1.86
TY2A-FP0CX61 SOP4YJL192C 705 nt3.42□□□□□ -1.86
TY2A-FP0CX61 YET1YKL065C 621 nt3.42□□□□□ -1.86
TY2A-FP0CX61 RPN13YLR421C 471 nt3.42□□□□□ -1.86
TY2A-FP0CX61 YNL089CYNL089C 477 nt3.42□□□□□ -1.86
TY2A-FP0CX61 GRE2YOL151W 1029 nt3.42□□□□□ -1.86
TY2A-FP0CX61 snR17asnR17a 333 nt3.42□□□□□ -1.86
TY2A-FP0CX61 MBA1YBR185C 837 nt3.42□□□□□ -1.86
TY2A-FP0CX61 PPZ1YML016C 2079 nt3.42□□□□□ -1.86
TY2A-FP0CX61 VPS53YJL029C 2469 nt3.42□□□□□ -1.86
TY2A-FP0CX61 TIF4631YGR162W 2859 nt3.41□□□□□ -1.86
TY2A-FP0CX61 UBX3YDL091C 1368 nt3.41□□□□□ -1.86
TY2A-FP0CX61 YDL050CYDL050C 372 nt3.41□□□□□ -1.86
TY2A-FP0CX61 YGR109W-AYGR109W-A 873 nt3.41□□□□□ -1.86
TY2A-FP0CX61 YGR161W-CYGR161W-C 279 nt3.41□□□□□ -1.86
TY2A-FP0CX61 YIL082WYIL082W 873 nt3.41□□□□□ -1.86
TY2A-FP0CX61 DAL2YIR029W 1032 nt3.41□□□□□ -1.86
TY2A-FP0CX61 YPT7YML001W 627 nt3.41□□□□□ -1.86
TY2A-FP0CX61 GPI13YLL031C 3054 nt3.41□□□□□ -1.86
TY2A-FP0CX61 SEC15YGL233W 2733 nt3.41□□□□□ -1.86
TY2A-FP0CX61 CIN1YOR349W 3045 nt3.41□□□□□ -1.86
TY2A-FP0CX61 SLK19YOR195W 2466 nt3.41□□□□□ -1.86
TY2A-FP0CX61 FAS1YKL182W 6156 nt3.4□□□□□ -1.86
TY2A-FP0CX61 PEX5YDR244W 1839 nt3.4□□□□□ -1.86
TY2A-FP0CX61 SRD1YCR018C 666 nt3.4□□□□□ -1.87
TY2A-FP0CX61 MRPL11YDL202W 750 nt3.4□□□□□ -1.87
TY2A-FP0CX61 THO1YER063W 657 nt3.4□□□□□ -1.87
TY2A-FP0CX61 YGL039WYGL039W 1047 nt3.4□□□□□ -1.87
TY2A-FP0CX61 SAE2YGL175C 1038 nt3.4□□□□□ -1.87
TY2A-FP0CX61 VMA21YGR105W 234 nt3.4□□□□□ -1.87
TY2A-FP0CX61 PDX1YGR193C 1233 nt3.4□□□□□ -1.87
TY2A-FP0CX61 RPL17AYKL180W 555 nt3.4□□□□□ -1.87
TY2A-FP0CX61 YLR177WYLR177W 1887 nt3.4□□□□□ -1.87
TY2A-FP0CX61 ECI1YLR284C 843 nt3.4□□□□□ -1.87
TY2A-FP0CX61 IRC21YMR073C 606 nt3.4□□□□□ -1.87
TY2A-FP0CX61 MUB1YMR100W 1863 nt3.4□□□□□ -1.87
TY2A-FP0CX61 UBP8YMR223W 1416 nt3.4□□□□□ -1.87
TY2A-FP0CX61 MPD2YOL088C 834 nt3.4□□□□□ -1.87
TY2A-FP0CX61 CHD1YER164W 4407 nt3.4□□□□□ -1.87
TY2A-FP0CX61 SSM4YIL030C 3960 nt3.4□□□□□ -1.87
TY2A-FP0CX61 KRE5YOR336W 4098 nt3.39□□□□□ -1.87
TY2A-FP0CX61 NSA1YGL111W 1392 nt3.39□□□□□ -1.87
TY2A-FP0CX61 UBP5YER144C 2418 nt3.39□□□□□ -1.87
TY2A-FP0CX61 CTF13YMR094W 1437 nt3.39□□□□□ -1.87
TY2A-FP0CX61 RAD26YJR035W 3258 nt3.39□□□□□ -1.87
TY2A-FP0CX61 snR5snR5 204 nt3.39□□□□□ -1.87
TY2A-FP0CX61 YCR045W-AYCR045W-A 351 nt3.39□□□□□ -1.87
TY2A-FP0CX61 PPX1YHR201C 1194 nt3.39□□□□□ -1.87
TY2A-FP0CX61 VMA5YKL080W 1179 nt3.39□□□□□ -1.87
TY2A-FP0CX61 YOR283WYOR283W 693 nt3.39□□□□□ -1.87
TY2A-FP0CX61 YPL088WYPL088W 1029 nt3.39□□□□□ -1.87
TY2A-FP0CX61 ERG9YHR190W 1335 nt3.39□□□□□ -1.87
TY2A-FP0CX61 RAD4YER162C 2265 nt3.39□□□□□ -1.87
TY2A-FP0CX61 PHO81YGR233C 3537 nt3.38□□□□□ -1.87
TY2A-FP0CX61 BSC1YDL037C 987 nt3.38□□□□□ -1.87
TY2A-FP0CX61 snR9snR9 187 nt3.38□□□□□ -1.87
TY2A-FP0CX61 YDR133CYDR133C 336 nt3.38□□□□□ -1.87
TY2A-FP0CX61 NTF2YER009W 378 nt3.38□□□□□ -1.87
TY2A-FP0CX61 YKL023C-AYKL023C-A 228 nt3.38□□□□□ -1.87
TY2A-FP0CX61 RPL15AYLR029C 615 nt3.38□□□□□ -1.87
TY2A-FP0CX61 GMC2YLR445W 567 nt3.38□□□□□ -1.87
TY2A-FP0CX61 RIM11YMR139W 1113 nt3.38□□□□□ -1.87
TY2A-FP0CX61 CSM4YPL200W 471 nt3.38□□□□□ -1.87
TY2A-FP0CX61 YPR077CYPR077C 372 nt3.38□□□□□ -1.87
TY2A-FP0CX61 YBR137WYBR137W 540 nt3.38□□□□□ -1.87
TY2A-FP0CX61 BRE5YNR051C 1548 nt3.38□□□□□ -1.87
TY2A-FP0CX61 SSE2YBR169C 2082 nt3.37□□□□□ -1.87
TY2A-FP0CX61 SKN7YHR206W 1869 nt3.37□□□□□ -1.87
TY2A-FP0CX61 RAD2YGR258C 3096 nt3.37□□□□□ -1.87
TY2A-FP0CX61 YDR262WYDR262W 819 nt3.37□□□□□ -1.87
TY2A-FP0CX61 SUP56tL(CAA)A 82 nt3.37□□□□□ -1.87
TY2A-FP0CX61 SUP53tL(CAA)C 82 nt3.37□□□□□ -1.87
TY2A-FP0CX61 tL(CAA)DtL(CAA)D 82 nt3.37□□□□□ -1.87
TY2A-FP0CX61 tL(CAA)G1tL(CAA)G1 82 nt3.37□□□□□ -1.87
TY2A-FP0CX61 SUP54tL(CAA)G2 82 nt3.37□□□□□ -1.87
TY2A-FP0CX61 tL(CAA)G3tL(CAA)G3 82 nt3.37□□□□□ -1.87
TY2A-FP0CX61 tL(CAA)KtL(CAA)K 82 nt3.37□□□□□ -1.87
TY2A-FP0CX61 tL(CAA)LtL(CAA)L 82 nt3.37□□□□□ -1.87
TY2A-FP0CX61 tL(CAA)MtL(CAA)M 82 nt3.37□□□□□ -1.87
TY2A-FP0CX61 tL(CAA)NtL(CAA)N 82 nt3.37□□□□□ -1.87
TY2A-FP0CX61 BCD1YHR040W 1101 nt3.37□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 125.2 ms