Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 GCD2YGR083C 1956 nt3.98□□□□□ -1.77
SSM4P40318 GYP7YDL234C 2241 nt3.98□□□□□ -1.77
SSM4P40318 BAR1YIL015W 1764 nt3.97□□□□□ -1.77
SSM4P40318 ATP16YDL004W 483 nt3.97□□□□□ -1.77
SSM4P40318 USE1YGL098W 738 nt3.97□□□□□ -1.77
SSM4P40318 TAM41YGR046W 1158 nt3.97□□□□□ -1.77
SSM4P40318 YGR283CYGR283C 1026 nt3.97□□□□□ -1.77
SSM4P40318 RNR2YJL026W 1200 nt3.97□□□□□ -1.77
SSM4P40318 YJR111CYJR111C 852 nt3.97□□□□□ -1.77
SSM4P40318 RPL33AYPL143W 324 nt3.97□□□□□ -1.77
SSM4P40318 ISM1YPL040C 3009 nt3.97□□□□□ -1.77
SSM4P40318 CHS3YBR023C 3498 nt3.97□□□□□ -1.77
SSM4P40318 ERB1YMR049C 2424 nt3.97□□□□□ -1.77
SSM4P40318 VPS64YDR200C 1815 nt3.97□□□□□ -1.77
SSM4P40318 ARO1YDR127W 4767 nt3.96□□□□□ -1.77
SSM4P40318 DPP1YDR284C 870 nt3.96□□□□□ -1.77
SSM4P40318 ECM11YDR446W 909 nt3.96□□□□□ -1.77
SSM4P40318 YGL242CYGL242C 546 nt3.96□□□□□ -1.77
SSM4P40318 COX6YHR051W 447 nt3.96□□□□□ -1.77
SSM4P40318 SVP26YHR181W 687 nt3.96□□□□□ -1.77
SSM4P40318 YHR214C-DYHR214C-D 294 nt3.96□□□□□ -1.77
SSM4P40318 BUR2YLR226W 1188 nt3.96□□□□□ -1.77
SSM4P40318 YAR069CYAR069C 294 nt3.96□□□□□ -1.77
SSM4P40318 END3YNL084C 1050 nt3.96□□□□□ -1.77
SSM4P40318 HBT1YDL223C 3141 nt3.96□□□□□ -1.78
SSM4P40318 MIP6YHR015W 1980 nt3.96□□□□□ -1.78
SSM4P40318 SEC6YIL068C 2418 nt3.96□□□□□ -1.78
SSM4P40318 LRS4YDR439W 1044 nt3.95□□□□□ -1.78
SSM4P40318 ECO1YFR027W 846 nt3.95□□□□□ -1.78
SSM4P40318 YBL068W-AYBL068W-A 237 nt3.95□□□□□ -1.78
SSM4P40318 RIB5YBR256C 717 nt3.95□□□□□ -1.78
SSM4P40318 SLY41YOR307C 1362 nt3.95□□□□□ -1.78
SSM4P40318 PKP2YGL059W 1476 nt3.95□□□□□ -1.78
SSM4P40318 FLO10YKR102W 3510 nt3.95□□□□□ -1.78
SSM4P40318 AI4Q0065 1671 nt3.95□□□□□ -1.78
SSM4P40318 RRP42YDL111C 798 nt3.95□□□□□ -1.78
SSM4P40318 PET100YDR079W 336 nt3.95□□□□□ -1.78
SSM4P40318 HTB1YDR224C 396 nt3.95□□□□□ -1.78
SSM4P40318 GUK1YDR454C 564 nt3.95□□□□□ -1.78
SSM4P40318 YDR491CYDR491C 492 nt3.95□□□□□ -1.78
SSM4P40318 RPC25YKL144C 639 nt3.95□□□□□ -1.78
SSM4P40318 PPT2YPL148C 522 nt3.95□□□□□ -1.78
SSM4P40318 CUP9YPL177C 921 nt3.95□□□□□ -1.78
SSM4P40318 YPL276WYPL276W 438 nt3.95□□□□□ -1.78
SSM4P40318 WHI3YNL197C 1986 nt3.94□□□□□ -1.78
SSM4P40318 NSP1YJL041W 2472 nt3.94□□□□□ -1.78
SSM4P40318 ALG8YOR067C 1734 nt3.94□□□□□ -1.78
SSM4P40318 CEP3YMR168C 1827 nt3.94□□□□□ -1.78
SSM4P40318 EMP70YLR083C 2004 nt3.94□□□□□ -1.78
SSM4P40318 YCR099CYCR099C 468 nt3.94□□□□□ -1.78
SSM4P40318 RPS13YDR064W 456 nt3.94□□□□□ -1.78
SSM4P40318 YHR097CYHR097C 1101 nt3.94□□□□□ -1.78
SSM4P40318 YAL016C-BYAL016C-B 186 nt3.94□□□□□ -1.78
SSM4P40318 MIC27YNL100W 705 nt3.94□□□□□ -1.78
SSM4P40318 SUC2YIL162W 1599 nt3.93□□□□□ -1.78
SSM4P40318 VIP1YLR410W 3441 nt3.93□□□□□ -1.78
SSM4P40318 SAG1YJR004C 1953 nt3.93□□□□□ -1.78
SSM4P40318 ESL2YKR096W 3588 nt3.93□□□□□ -1.78
SSM4P40318 MPS2YGL075C 1164 nt3.93□□□□□ -1.78
SSM4P40318 SPT16YGL207W 3108 nt3.93□□□□□ -1.78
SSM4P40318 DNA2YHR164C 4569 nt3.93□□□□□ -1.78
SSM4P40318 PBA1YLR199C 831 nt3.93□□□□□ -1.78
SSM4P40318 SMD2YLR275W 333 nt3.93□□□□□ -1.78
SSM4P40318 PIN4YBL051C 2007 nt3.93□□□□□ -1.78
SSM4P40318 HUA2YOR284W 732 nt3.93□□□□□ -1.78
SSM4P40318 KRE5YOR336W 4098 nt3.92□□□□□ -1.78
SSM4P40318 RPN1YHR027C 2982 nt3.92□□□□□ -1.78
SSM4P40318 CAF130YGR134W 3369 nt3.92□□□□□ -1.78
SSM4P40318 TGL2YDR058C 981 nt3.92□□□□□ -1.78
SSM4P40318 CGR1YGL029W 363 nt3.92□□□□□ -1.78
SSM4P40318 RPS12YOR369C 432 nt3.92□□□□□ -1.78
SSM4P40318 SLM2YNL047C 1971 nt3.91□□□□□ -1.78
SSM4P40318 YDL158CYDL158C 309 nt3.91□□□□□ -1.78
SSM4P40318 YIP5YGL161C 933 nt3.91□□□□□ -1.78
SSM4P40318 COQ9YLR201C 783 nt3.91□□□□□ -1.78
SSM4P40318 YBL029C-AYBL029C-A 285 nt3.91□□□□□ -1.78
SSM4P40318 snR11snR11 258 nt3.91□□□□□ -1.78
SSM4P40318 GRX5YPL059W 453 nt3.91□□□□□ -1.78
SSM4P40318 EBS1YDR206W 2655 nt3.9□□□□□ -1.78
SSM4P40318 UTP5YDR398W 1932 nt3.9□□□□□ -1.79
SSM4P40318 PHD1YKL043W 1101 nt3.9□□□□□ -1.79
SSM4P40318 CDC5YMR001C 2118 nt3.9□□□□□ -1.79
SSM4P40318 RLP7YNL002C 969 nt3.9□□□□□ -1.79
SSM4P40318 MER1YNL210W 813 nt3.9□□□□□ -1.79
SSM4P40318 YOR238WYOR238W 912 nt3.9□□□□□ -1.79
SSM4P40318 YGL176CYGL176C 1665 nt3.9□□□□□ -1.79
SSM4P40318 YGR067CYGR067C 2415 nt3.89□□□□□ -1.79
SSM4P40318 CWC23YGL128C 852 nt3.89□□□□□ -1.79
SSM4P40318 RGI2YIL057C 495 nt3.89□□□□□ -1.79
SSM4P40318 TMA108YIL137C 2841 nt3.89□□□□□ -1.79
SSM4P40318 SLP1YOR154W 1764 nt3.88□□□□□ -1.79
SSM4P40318 YDR089WYDR089W 2610 nt3.88□□□□□ -1.79
SSM4P40318 AXL1YPR122W 3627 nt3.88□□□□□ -1.79
SSM4P40318 VPS9YML097C 1356 nt3.88□□□□□ -1.79
SSM4P40318 FRE4YNR060W 2160 nt3.88□□□□□ -1.79
SSM4P40318 RPL13AYDL082W 600 nt3.88□□□□□ -1.79
SSM4P40318 PHM6YDR281C 315 nt3.88□□□□□ -1.79
SSM4P40318 SPT2YER161C 1002 nt3.88□□□□□ -1.79
SSM4P40318 YFR010W-AYFR010W-A 189 nt3.88□□□□□ -1.79
SSM4P40318 BTN2YGR142W 1233 nt3.88□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 124.9 ms