Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
UPK1BO75841 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.43■□□□□ 0.54
UPK1BO75841 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1BO75841 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1BO75841 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.43■□□□□ 0.54
UPK1BO75841 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.43■□□□□ 0.54
UPK1BO75841 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1BO75841 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1BO75841 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.43■□□□□ 0.54
UPK1BO75841 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1BO75841 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
UPK1BO75841 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.43■□□□□ 0.54
UPK1BO75841 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1BO75841 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1BO75841 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1BO75841 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
UPK1BO75841 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1BO75841 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.43■□□□□ 0.54
UPK1BO75841 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1BO75841 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1BO75841 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1BO75841 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
UPK1BO75841 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1BO75841 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1BO75841 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1BO75841 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1BO75841 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1BO75841 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1BO75841 ECEL1P2-201ENST00000461596 1295 ntBASIC18.42■□□□□ 0.54
UPK1BO75841 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.42■□□□□ 0.54
UPK1BO75841 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1BO75841 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.42■□□□□ 0.54
UPK1BO75841 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1BO75841 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.41■□□□□ 0.54
UPK1BO75841 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.41■□□□□ 0.54
UPK1BO75841 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1BO75841 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1BO75841 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1BO75841 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
UPK1BO75841 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.41■□□□□ 0.54
UPK1BO75841 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.41■□□□□ 0.54
UPK1BO75841 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1BO75841 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1BO75841 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1BO75841 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1BO75841 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.41■□□□□ 0.54
UPK1BO75841 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.41■□□□□ 0.54
UPK1BO75841 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1BO75841 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1BO75841 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1BO75841 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1BO75841 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1BO75841 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1BO75841 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1BO75841 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1BO75841 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1BO75841 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.4■□□□□ 0.54
UPK1BO75841 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1BO75841 AC009086.3-201ENST00000623486 1008 ntBASIC18.4■□□□□ 0.54
UPK1BO75841 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
UPK1BO75841 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1BO75841 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1BO75841 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1BO75841 AL162377.1-201ENST00000618844 1793 ntBASIC18.4■□□□□ 0.54
UPK1BO75841 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1BO75841 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UPK1BO75841 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.39■□□□□ 0.54
UPK1BO75841 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.39■□□□□ 0.54
UPK1BO75841 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.39■□□□□ 0.54
UPK1BO75841 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UPK1BO75841 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
UPK1BO75841 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPK1BO75841 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.39■□□□□ 0.53
UPK1BO75841 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPK1BO75841 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPK1BO75841 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPK1BO75841 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.39■□□□□ 0.53
UPK1BO75841 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPK1BO75841 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.39■□□□□ 0.53
UPK1BO75841 AC011551.1-201ENST00000614101 683 ntBASIC18.39■□□□□ 0.53
UPK1BO75841 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPK1BO75841 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPK1BO75841 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPK1BO75841 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPK1BO75841 PLK5-205ENST00000642079 1969 ntBASIC18.39■□□□□ 0.53
UPK1BO75841 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPK1BO75841 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPK1BO75841 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPK1BO75841 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
UPK1BO75841 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPK1BO75841 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
UPK1BO75841 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPK1BO75841 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.38■□□□□ 0.53
UPK1BO75841 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPK1BO75841 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPK1BO75841 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPK1BO75841 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
UPK1BO75841 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.38■□□□□ 0.53
UPK1BO75841 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPK1BO75841 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms