Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.13■□□□□ 0.97
LDB2O43679 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDB2O43679 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LDB2O43679 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDB2O43679 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDB2O43679 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LDB2O43679 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
LDB2O43679 CCDC92B-201ENST00000575506 885 ntBASIC21.12■□□□□ 0.97
LDB2O43679 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDB2O43679 KRT87P-202ENST00000534226 1464 ntBASIC21.12■□□□□ 0.97
LDB2O43679 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LDB2O43679 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDB2O43679 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
LDB2O43679 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LDB2O43679 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LDB2O43679 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.11■□□□□ 0.97
LDB2O43679 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.11■□□□□ 0.97
LDB2O43679 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LDB2O43679 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LDB2O43679 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LDB2O43679 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LDB2O43679 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.11■□□□□ 0.97
LDB2O43679 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LDB2O43679 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LDB2O43679 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LDB2O43679 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
LDB2O43679 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LDB2O43679 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LDB2O43679 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.11■□□□□ 0.97
LDB2O43679 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LDB2O43679 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LDB2O43679 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LDB2O43679 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
LDB2O43679 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.1■□□□□ 0.97
LDB2O43679 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LDB2O43679 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
LDB2O43679 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
LDB2O43679 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LDB2O43679 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
LDB2O43679 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LDB2O43679 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LDB2O43679 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LDB2O43679 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LDB2O43679 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LDB2O43679 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LDB2O43679 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.09■□□□□ 0.97
LDB2O43679 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LDB2O43679 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LDB2O43679 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LDB2O43679 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LDB2O43679 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.09■□□□□ 0.97
LDB2O43679 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.09■□□□□ 0.97
LDB2O43679 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LDB2O43679 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LDB2O43679 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.09■□□□□ 0.97
LDB2O43679 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LDB2O43679 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.09■□□□□ 0.97
LDB2O43679 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
LDB2O43679 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.09■□□□□ 0.97
LDB2O43679 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LDB2O43679 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LDB2O43679 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LDB2O43679 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LDB2O43679 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.08■□□□□ 0.97
LDB2O43679 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.08■□□□□ 0.97
LDB2O43679 KRT18P14-201ENST00000534205 1250 ntBASIC21.08■□□□□ 0.97
LDB2O43679 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.08■□□□□ 0.97
LDB2O43679 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.08■□□□□ 0.97
LDB2O43679 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.08■□□□□ 0.96
LDB2O43679 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LDB2O43679 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.08■□□□□ 0.96
LDB2O43679 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.07■□□□□ 0.96
LDB2O43679 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LDB2O43679 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LDB2O43679 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
LDB2O43679 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LDB2O43679 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
LDB2O43679 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.07■□□□□ 0.96
LDB2O43679 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
LDB2O43679 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.07■□□□□ 0.96
LDB2O43679 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LDB2O43679 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.07■□□□□ 0.96
LDB2O43679 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LDB2O43679 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LDB2O43679 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LDB2O43679 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.06■□□□□ 0.96
LDB2O43679 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LDB2O43679 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.06■□□□□ 0.96
LDB2O43679 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.06■□□□□ 0.96
LDB2O43679 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LDB2O43679 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LDB2O43679 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LDB2O43679 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LDB2O43679 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.06■□□□□ 0.96
LDB2O43679 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LDB2O43679 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.05■□□□□ 0.96
LDB2O43679 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LDB2O43679 AC026271.2-201ENST00000428091 497 ntBASIC21.05■□□□□ 0.96
LDB2O43679 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.05■□□□□ 0.96
LDB2O43679 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms