Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 RPL27BYDR471W 411 nt2.71□□□□□ -1.98
TY1B-HO13535 YAL026C-AYAL026C-A 438 nt2.71□□□□□ -1.98
TY1B-HO13535 POS5YPL188W 1245 nt2.71□□□□□ -1.98
TY1B-HO13535 ADY4YLR227C 1482 nt2.71□□□□□ -1.98
TY1B-HO13535 GSH2YOL049W 1476 nt2.71□□□□□ -1.98
TY1B-HO13535 TRM7YBR061C 933 nt2.7□□□□□ -1.98
TY1B-HO13535 ECM29YHL030W 5607 nt2.7□□□□□ -1.98
TY1B-HO13535 SCH9YHR205W 2475 nt2.7□□□□□ -1.98
TY1B-HO13535 LYS9YNR050C 1341 nt2.7□□□□□ -1.98
TY1B-HO13535 HYP2YEL034W 474 nt2.69□□□□□ -1.98
TY1B-HO13535 YMR141CYMR141C 309 nt2.69□□□□□ -1.98
TY1B-HO13535 RNA1YMR235C 1224 nt2.69□□□□□ -1.98
TY1B-HO13535 YBT1YLL048C 4986 nt2.69□□□□□ -1.98
TY1B-HO13535 STF2YGR008C 255 nt2.69□□□□□ -1.98
TY1B-HO13535 FRE2YKL220C 2136 nt2.69□□□□□ -1.98
TY1B-HO13535 YER067C-AYER067C-A 324 nt2.68□□□□□ -1.98
TY1B-HO13535 SDP1YIL113W 630 nt2.68□□□□□ -1.98
TY1B-HO13535 LSM1YJL124C 519 nt2.68□□□□□ -1.98
TY1B-HO13535 SSU72YNL222W 621 nt2.68□□□□□ -1.98
TY1B-HO13535 RAD50YNL250W 3939 nt2.68□□□□□ -1.98
TY1B-HO13535 VHR2YER064C 1518 nt2.68□□□□□ -1.98
TY1B-HO13535 AML1YGR001C 747 nt2.67□□□□□ -1.98
TY1B-HO13535 TPT1YOL102C 693 nt2.67□□□□□ -1.98
TY1B-HO13535 UTP14YML093W 2700 nt2.67□□□□□ -1.98
TY1B-HO13535 SWD2YKL018W 990 nt2.66□□□□□ -1.98
TY1B-HO13535 YSA1YBR111C 696 nt2.66□□□□□ -1.98
TY1B-HO13535 NUM1YDR150W 8247 nt2.66□□□□□ -1.98
TY1B-HO13535 YER085CYER085C 522 nt2.66□□□□□ -1.98
TY1B-HO13535 YOR392WYOR392W 444 nt2.66□□□□□ -1.98
TY1B-HO13535 YBR287WYBR287W 1284 nt2.66□□□□□ -1.98
TY1B-HO13535 SNU114YKL173W 3027 nt2.66□□□□□ -1.98
TY1B-HO13535 SMP3YOR149C 1551 nt2.65□□□□□ -1.98
TY1B-HO13535 ERT1YBR239C 1590 nt2.65□□□□□ -1.98
TY1B-HO13535 HMLALPHA1YCL066W 528 nt2.65□□□□□ -1.99
TY1B-HO13535 MATALPHA1YCR040W 528 nt2.65□□□□□ -1.99
TY1B-HO13535 TWF1YGR080W 999 nt2.65□□□□□ -1.99
TY1B-HO13535 SGM1YJR134C 2124 nt2.65□□□□□ -1.99
TY1B-HO13535 YLL047WYLL047W 384 nt2.65□□□□□ -1.99
TY1B-HO13535 YHC1YLR298C 696 nt2.65□□□□□ -1.99
TY1B-HO13535 TRM732YMR259C 4263 nt2.64□□□□□ -1.99
TY1B-HO13535 FAB1YFR019W 6837 nt2.64□□□□□ -1.99
TY1B-HO13535 BDP1YNL039W 1785 nt2.64□□□□□ -1.99
TY1B-HO13535 ADK1YDR226W 669 nt2.64□□□□□ -1.99
TY1B-HO13535 PIB1YDR313C 861 nt2.64□□□□□ -1.99
TY1B-HO13535 YIL046W-AYIL046W-A 165 nt2.64□□□□□ -1.99
TY1B-HO13535 MUD1YBR119W 897 nt2.64□□□□□ -1.99
TY1B-HO13535 LTE1YAL024C 4308 nt2.63□□□□□ -1.99
TY1B-HO13535 MIG1YGL035C 1515 nt2.63□□□□□ -1.99
TY1B-HO13535 ATG29YPL166W 642 nt2.63□□□□□ -1.99
TY1B-HO13535 SNX41YDR425W 1878 nt2.63□□□□□ -1.99
TY1B-HO13535 ALE1YOR175C 1860 nt2.63□□□□□ -1.99
TY1B-HO13535 RKM3YBR030W 1659 nt2.62□□□□□ -1.99
TY1B-HO13535 LCB4YOR171C 1875 nt2.62□□□□□ -1.99
TY1B-HO13535 PGS1YCL004W 1566 nt2.62□□□□□ -1.99
TY1B-HO13535 MDM20YOL076W 2391 nt2.62□□□□□ -1.99
TY1B-HO13535 RTS3YGR161C 792 nt2.62□□□□□ -1.99
TY1B-HO13535 YMR086C-AYMR086C-A 339 nt2.62□□□□□ -1.99
TY1B-HO13535 IST1YNL265C 897 nt2.62□□□□□ -1.99
TY1B-HO13535 AIM39YOL053W 1188 nt2.62□□□□□ -1.99
TY1B-HO13535 HEM4YOR278W 828 nt2.62□□□□□ -1.99
TY1B-HO13535 ALG11YNL048W 1647 nt2.62□□□□□ -1.99
TY1B-HO13535 BTS1YPL069C 1008 nt2.61□□□□□ -1.99
TY1B-HO13535 IMH1YLR309C 2736 nt2.61□□□□□ -1.99
TY1B-HO13535 SPC72YAL047C 1869 nt2.61□□□□□ -1.99
TY1B-HO13535 YEL032C-AYEL032C-A 162 nt2.61□□□□□ -1.99
TY1B-HO13535 SAE2YGL175C 1038 nt2.61□□□□□ -1.99
TY1B-HO13535 ERV29YGR284C 933 nt2.61□□□□□ -1.99
TY1B-HO13535 KOG1YHR186C 4674 nt2.61□□□□□ -1.99
TY1B-HO13535 GCD7YLR291C 1146 nt2.61□□□□□ -1.99
TY1B-HO13535 DSL1YNL258C 2265 nt2.6□□□□□ -1.99
TY1B-HO13535 YOS1YER074W-A 258 nt2.6□□□□□ -1.99
TY1B-HO13535 COQ9YLR201C 783 nt2.6□□□□□ -1.99
TY1B-HO13535 ISW2YOR304W 3363 nt2.6□□□□□ -1.99
TY1B-HO13535 UBP12YJL197W 3765 nt2.6□□□□□ -1.99
TY1B-HO13535 MIC60YKR016W 1623 nt2.6□□□□□ -1.99
TY1B-HO13535 CHS1YNL192W 3396 nt2.59□□□□□ -1.99
TY1B-HO13535 VMA8YEL051W 771 nt2.59□□□□□ -1.99
TY1B-HO13535 COS6YGR295C 1146 nt2.59□□□□□ -1.99
TY1B-HO13535 YNL228WYNL228W 777 nt2.59□□□□□ -1.99
TY1B-HO13535 NCB2YDR397C 441 nt2.59□□□□□ -2
TY1B-HO13535 SEC28YIL076W 891 nt2.59□□□□□ -2
TY1B-HO13535 PUF2YPR042C 3228 nt2.58□□□□□ -2
TY1B-HO13535 SEC7YDR170C 6030 nt2.58□□□□□ -2
TY1B-HO13535 IML1YJR138W 4755 nt2.58□□□□□ -2
TY1B-HO13535 YJL181WYJL181W 1836 nt2.58□□□□□ -2
TY1B-HO13535 YDL041WYDL041W 354 nt2.58□□□□□ -2
TY1B-HO13535 YKL075CYKL075C 1353 nt2.58□□□□□ -2
TY1B-HO13535 PSD2YGR170W 3417 nt2.57□□□□□ -2
TY1B-HO13535 BUD6YLR319C 2367 nt2.57□□□□□ -2
TY1B-HO13535 YMR306C-AYMR306C-A 390 nt2.57□□□□□ -2
TY1B-HO13535 HAT1YPL001W 1125 nt2.57□□□□□ -2
TY1B-HO13535 ARA1YBR149W 1035 nt2.57□□□□□ -2
TY1B-HO13535 KRE2YDR483W 1329 nt2.57□□□□□ -2
TY1B-HO13535 TVP15YDR100W 432 nt2.56□□□□□ -2
TY1B-HO13535 CPA2YJR109C 3357 nt2.56□□□□□ -2
TY1B-HO13535 ECM13YBL043W 774 nt2.56□□□□□ -2
TY1B-HO13535 SHE4YOR035C 2370 nt2.56□□□□□ -2
TY1B-HO13535 CCM1YGR150C 2595 nt2.56□□□□□ -2
TY1B-HO13535 YPR1YDR368W 939 nt2.56□□□□□ -2
TY1B-HO13535 ERP1YAR002C-A 660 nt2.56□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 20.6 ms