Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV23-1A0A0A0MS06 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV23-1A0A0A0MS06 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV23-1A0A0A0MS06 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV23-1A0A0A0MS06 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV23-1A0A0A0MS06 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRBV23-1A0A0A0MS06 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV23-1A0A0A0MS06 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.73■□□□□ 0.43
TRBV23-1A0A0A0MS06 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRBV23-1A0A0A0MS06 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV23-1A0A0A0MS06 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.73■□□□□ 0.43
TRBV23-1A0A0A0MS06 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV23-1A0A0A0MS06 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV23-1A0A0A0MS06 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV23-1A0A0A0MS06 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV23-1A0A0A0MS06 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV23-1A0A0A0MS06 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV23-1A0A0A0MS06 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV23-1A0A0A0MS06 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV23-1A0A0A0MS06 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV23-1A0A0A0MS06 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
TRBV23-1A0A0A0MS06 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV23-1A0A0A0MS06 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV23-1A0A0A0MS06 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRBV23-1A0A0A0MS06 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV23-1A0A0A0MS06 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 AC005224.4-201ENST00000583262 1652 ntBASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV23-1A0A0A0MS06 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRBV23-1A0A0A0MS06 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.71■□□□□ 0.42
TRBV23-1A0A0A0MS06 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 AP006587.3-201ENST00000525742 1516 ntBASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.7■□□□□ 0.42
TRBV23-1A0A0A0MS06 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 AC097381.1-201ENST00000429019 1296 ntBASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 MIR6821-201ENST00000617625 74 ntBASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV23-1A0A0A0MS06 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV23-1A0A0A0MS06 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms