Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
EFCC1Q9HA90 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
EFCC1Q9HA90 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
EFCC1Q9HA90 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
EFCC1Q9HA90 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
EFCC1Q9HA90 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
EFCC1Q9HA90 AC092068.2-201ENST00000590491 1708 ntBASIC24.62■■□□□ 1.53
EFCC1Q9HA90 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
EFCC1Q9HA90 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
EFCC1Q9HA90 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
EFCC1Q9HA90 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC24.62■■□□□ 1.53
EFCC1Q9HA90 CBFB-203ENST00000561924 584 ntTSL 5 BASIC24.62■■□□□ 1.53
EFCC1Q9HA90 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.62■■□□□ 1.53
EFCC1Q9HA90 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC24.62■■□□□ 1.53
EFCC1Q9HA90 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
EFCC1Q9HA90 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
EFCC1Q9HA90 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.62■■□□□ 1.53
EFCC1Q9HA90 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
EFCC1Q9HA90 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 PEX7-202ENST00000367756 680 ntTSL 3 BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 AC091874.3-201ENST00000512672 1195 ntBASIC24.6■■□□□ 1.53
EFCC1Q9HA90 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 INO80E-214ENST00000620599 515 ntTSL 2 BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
EFCC1Q9HA90 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
EFCC1Q9HA90 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
EFCC1Q9HA90 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
EFCC1Q9HA90 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
EFCC1Q9HA90 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
EFCC1Q9HA90 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
EFCC1Q9HA90 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.59■■□□□ 1.53
EFCC1Q9HA90 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC24.59■■□□□ 1.53
EFCC1Q9HA90 AC026366.1-201ENST00000488803 879 ntBASIC24.59■■□□□ 1.53
EFCC1Q9HA90 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.59■■□□□ 1.53
EFCC1Q9HA90 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.59■■□□□ 1.53
EFCC1Q9HA90 AC073648.6-201ENST00000641589 218 ntBASIC24.59■■□□□ 1.53
EFCC1Q9HA90 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
EFCC1Q9HA90 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
EFCC1Q9HA90 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
EFCC1Q9HA90 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
EFCC1Q9HA90 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
EFCC1Q9HA90 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
EFCC1Q9HA90 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.58■■□□□ 1.53
EFCC1Q9HA90 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC24.58■■□□□ 1.53
EFCC1Q9HA90 ECEL1P3-201ENST00000427961 737 ntBASIC24.58■■□□□ 1.53
EFCC1Q9HA90 UBE2SP1-201ENST00000450587 669 ntBASIC24.58■■□□□ 1.53
EFCC1Q9HA90 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.58■■□□□ 1.53
EFCC1Q9HA90 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC24.58■■□□□ 1.53
EFCC1Q9HA90 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.58■■□□□ 1.53
EFCC1Q9HA90 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
EFCC1Q9HA90 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
EFCC1Q9HA90 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.58■■□□□ 1.52
EFCC1Q9HA90 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
EFCC1Q9HA90 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
EFCC1Q9HA90 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
EFCC1Q9HA90 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
EFCC1Q9HA90 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
EFCC1Q9HA90 MME-217ENST00000616757 1315 ntTSL 5 BASIC24.58■■□□□ 1.52
EFCC1Q9HA90 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC24.57■■□□□ 1.52
EFCC1Q9HA90 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.57■■□□□ 1.52
EFCC1Q9HA90 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.57■■□□□ 1.52
EFCC1Q9HA90 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
EFCC1Q9HA90 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
EFCC1Q9HA90 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
EFCC1Q9HA90 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
EFCC1Q9HA90 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
EFCC1Q9HA90 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.57■■□□□ 1.52
EFCC1Q9HA90 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
EFCC1Q9HA90 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
EFCC1Q9HA90 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.57■■□□□ 1.52
EFCC1Q9HA90 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
EFCC1Q9HA90 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms