Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SH3TC1Q8TE82 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SH3TC1Q8TE82 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SH3TC1Q8TE82 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.5■■□□□ 1.83
SH3TC1Q8TE82 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.5■■□□□ 1.83
SH3TC1Q8TE82 MIR4758-201ENST00000577688 71 ntBASIC26.5■■□□□ 1.83
SH3TC1Q8TE82 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SH3TC1Q8TE82 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SH3TC1Q8TE82 C1orf229-201ENST00000623686 2258 ntBASIC26.5■■□□□ 1.83
SH3TC1Q8TE82 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SH3TC1Q8TE82 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SH3TC1Q8TE82 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 AC093787.1-201ENST00000450396 207 ntBASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 PHB2-213ENST00000546111 858 ntTSL 2 BASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 MIR4651-201ENST00000582622 73 ntBASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 AC069236.1-201ENST00000604339 616 ntBASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 AC016405.3-201ENST00000607710 860 ntBASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.49■■□□□ 1.83
SH3TC1Q8TE82 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SH3TC1Q8TE82 RBM17P2-201ENST00000616397 1405 ntBASIC26.48■■□□□ 1.83
SH3TC1Q8TE82 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SH3TC1Q8TE82 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SH3TC1Q8TE82 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
SH3TC1Q8TE82 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC26.48■■□□□ 1.83
SH3TC1Q8TE82 AL512625.2-201ENST00000417533 625 ntBASIC26.48■■□□□ 1.83
SH3TC1Q8TE82 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.48■■□□□ 1.83
SH3TC1Q8TE82 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.48■■□□□ 1.83
SH3TC1Q8TE82 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.48■■□□□ 1.83
SH3TC1Q8TE82 AC008694.1-202ENST00000636953 945 ntBASIC26.48■■□□□ 1.83
SH3TC1Q8TE82 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.48■■□□□ 1.83
SH3TC1Q8TE82 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
SH3TC1Q8TE82 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SH3TC1Q8TE82 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.47■■□□□ 1.83
SH3TC1Q8TE82 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC26.47■■□□□ 1.83
SH3TC1Q8TE82 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.47■■□□□ 1.83
SH3TC1Q8TE82 AC003102.1-202ENST00000563394 1796 ntBASIC26.47■■□□□ 1.83
SH3TC1Q8TE82 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SH3TC1Q8TE82 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
SH3TC1Q8TE82 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.47■■□□□ 1.83
SH3TC1Q8TE82 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
SH3TC1Q8TE82 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SH3TC1Q8TE82 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SH3TC1Q8TE82 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SH3TC1Q8TE82 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.46■■□□□ 1.83
SH3TC1Q8TE82 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SH3TC1Q8TE82 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
SH3TC1Q8TE82 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SH3TC1Q8TE82 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.46■■□□□ 1.83
SH3TC1Q8TE82 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.46■■□□□ 1.83
SH3TC1Q8TE82 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SH3TC1Q8TE82 AC061975.6-201ENST00000579045 1553 ntBASIC26.46■■□□□ 1.83
SH3TC1Q8TE82 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
SH3TC1Q8TE82 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.46■■□□□ 1.83
SH3TC1Q8TE82 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.46■■□□□ 1.83
SH3TC1Q8TE82 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.46■■□□□ 1.83
SH3TC1Q8TE82 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SH3TC1Q8TE82 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SH3TC1Q8TE82 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SH3TC1Q8TE82 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
SH3TC1Q8TE82 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.83
SH3TC1Q8TE82 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.45■■□□□ 1.83
SH3TC1Q8TE82 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.45■■□□□ 1.83
SH3TC1Q8TE82 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC26.45■■□□□ 1.83
SH3TC1Q8TE82 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.45■■□□□ 1.83
SH3TC1Q8TE82 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
SH3TC1Q8TE82 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SH3TC1Q8TE82 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SH3TC1Q8TE82 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.45■■□□□ 1.82
SH3TC1Q8TE82 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
SH3TC1Q8TE82 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SH3TC1Q8TE82 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SH3TC1Q8TE82 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SH3TC1Q8TE82 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
SH3TC1Q8TE82 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SH3TC1Q8TE82 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.44■■□□□ 1.82
SH3TC1Q8TE82 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.44■■□□□ 1.82
SH3TC1Q8TE82 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
SH3TC1Q8TE82 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.44■■□□□ 1.82
SH3TC1Q8TE82 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SH3TC1Q8TE82 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SH3TC1Q8TE82 AC012676.1-201ENST00000574705 1949 ntBASIC26.44■■□□□ 1.82
SH3TC1Q8TE82 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.43■■□□□ 1.82
SH3TC1Q8TE82 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SH3TC1Q8TE82 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
SH3TC1Q8TE82 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
SH3TC1Q8TE82 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.43■■□□□ 1.82
SH3TC1Q8TE82 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.43■■□□□ 1.82
SH3TC1Q8TE82 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SH3TC1Q8TE82 AC243732.1-201ENST00000612648 864 ntBASIC26.43■■□□□ 1.82
SH3TC1Q8TE82 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms