Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
CDC42BPAQ5VT25 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CDC42BPAQ5VT25 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
CDC42BPAQ5VT25 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CDC42BPAQ5VT25 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CDC42BPAQ5VT25 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CDC42BPAQ5VT25 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC32.37■■■□□ 2.77
CDC42BPAQ5VT25 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC32.37■■■□□ 2.77
CDC42BPAQ5VT25 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC32.37■■■□□ 2.77
CDC42BPAQ5VT25 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CDC42BPAQ5VT25 KRT17P1-201ENST00000399211 1546 ntBASIC32.37■■■□□ 2.77
CDC42BPAQ5VT25 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC32.37■■■□□ 2.77
CDC42BPAQ5VT25 SERPINH1P1-201ENST00000419794 1249 ntBASIC32.37■■■□□ 2.77
CDC42BPAQ5VT25 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
CDC42BPAQ5VT25 AP003097.1-201ENST00000530657 1135 ntBASIC32.37■■■□□ 2.77
CDC42BPAQ5VT25 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC32.37■■■□□ 2.77
CDC42BPAQ5VT25 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CDC42BPAQ5VT25 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
CDC42BPAQ5VT25 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CDC42BPAQ5VT25 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CDC42BPAQ5VT25 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
CDC42BPAQ5VT25 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
CDC42BPAQ5VT25 AC006058.3-201ENST00000606217 1069 ntBASIC32.36■■■□□ 2.77
CDC42BPAQ5VT25 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CDC42BPAQ5VT25 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
CDC42BPAQ5VT25 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CDC42BPAQ5VT25 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CDC42BPAQ5VT25 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CDC42BPAQ5VT25 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
CDC42BPAQ5VT25 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
CDC42BPAQ5VT25 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC32.35■■■□□ 2.77
CDC42BPAQ5VT25 IRX5-204ENST00000560154 879 ntTSL 5 BASIC32.35■■■□□ 2.77
CDC42BPAQ5VT25 AL591742.1-201ENST00000604433 565 ntBASIC32.35■■■□□ 2.77
CDC42BPAQ5VT25 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CDC42BPAQ5VT25 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC32.35■■■□□ 2.77
CDC42BPAQ5VT25 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CDC42BPAQ5VT25 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC32.35■■■□□ 2.77
CDC42BPAQ5VT25 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CDC42BPAQ5VT25 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC32.34■■■□□ 2.77
CDC42BPAQ5VT25 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC32.34■■■□□ 2.77
CDC42BPAQ5VT25 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC32.34■■■□□ 2.77
CDC42BPAQ5VT25 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC32.34■■■□□ 2.77
CDC42BPAQ5VT25 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CDC42BPAQ5VT25 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC32.34■■■□□ 2.77
CDC42BPAQ5VT25 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC32.34■■■□□ 2.77
CDC42BPAQ5VT25 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC32.34■■■□□ 2.77
CDC42BPAQ5VT25 AC091799.1-201ENST00000422823 811 ntBASIC32.34■■■□□ 2.77
CDC42BPAQ5VT25 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC32.34■■■□□ 2.77
CDC42BPAQ5VT25 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 AC003102.1-202ENST00000563394 1796 ntBASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 ESRRAP1-201ENST00000400596 1257 ntBASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 AC008403.3-201ENST00000598924 454 ntBASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 COMT-203ENST00000403184 2217 ntTSL 2 BASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CDC42BPAQ5VT25 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CDC42BPAQ5VT25 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CDC42BPAQ5VT25 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
CDC42BPAQ5VT25 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CDC42BPAQ5VT25 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC32.32■■■□□ 2.76
CDC42BPAQ5VT25 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CDC42BPAQ5VT25 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC32.32■■■□□ 2.76
CDC42BPAQ5VT25 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CDC42BPAQ5VT25 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC32.32■■■□□ 2.76
CDC42BPAQ5VT25 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC32.32■■■□□ 2.76
CDC42BPAQ5VT25 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CDC42BPAQ5VT25 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CDC42BPAQ5VT25 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CDC42BPAQ5VT25 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CDC42BPAQ5VT25 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 AL355472.2-201ENST00000422958 438 ntBASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 OR2A1-AS1-201ENST00000462305 773 ntBASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
CDC42BPAQ5VT25 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC32.3■■■□□ 2.76
CDC42BPAQ5VT25 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CDC42BPAQ5VT25 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CDC42BPAQ5VT25 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CDC42BPAQ5VT25 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms