Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.39■■□□□ 1.33
PMS1P54277 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.39■■□□□ 1.33
PMS1P54277 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
PMS1P54277 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PMS1P54277 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PMS1P54277 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PMS1P54277 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PMS1P54277 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.38■■□□□ 1.33
PMS1P54277 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.38■■□□□ 1.33
PMS1P54277 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.38■■□□□ 1.33
PMS1P54277 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
PMS1P54277 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PMS1P54277 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PMS1P54277 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PMS1P54277 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PMS1P54277 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PMS1P54277 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PMS1P54277 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PMS1P54277 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PMS1P54277 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PMS1P54277 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PMS1P54277 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
PMS1P54277 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.37■■□□□ 1.33
PMS1P54277 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PMS1P54277 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
PMS1P54277 AL355001.2-201ENST00000620617 1191 ntBASIC23.37■■□□□ 1.33
PMS1P54277 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PMS1P54277 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.37■■□□□ 1.33
PMS1P54277 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PMS1P54277 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.37■■□□□ 1.33
PMS1P54277 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.36■■□□□ 1.33
PMS1P54277 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PMS1P54277 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
PMS1P54277 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.36■■□□□ 1.33
PMS1P54277 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
PMS1P54277 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PMS1P54277 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.36■■□□□ 1.33
PMS1P54277 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.36■■□□□ 1.33
PMS1P54277 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PMS1P54277 AC055733.4-201ENST00000638462 1354 ntBASIC23.36■■□□□ 1.33
PMS1P54277 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PMS1P54277 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PMS1P54277 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.35■■□□□ 1.33
PMS1P54277 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PMS1P54277 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
PMS1P54277 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PMS1P54277 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.35■■□□□ 1.33
PMS1P54277 AC105233.4-201ENST00000642045 216 ntBASIC23.35■■□□□ 1.33
PMS1P54277 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PMS1P54277 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.35■■□□□ 1.33
PMS1P54277 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.34■■□□□ 1.33
PMS1P54277 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
PMS1P54277 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.34■■□□□ 1.33
PMS1P54277 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.34■■□□□ 1.33
PMS1P54277 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.34■■□□□ 1.33
PMS1P54277 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PMS1P54277 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.34■■□□□ 1.33
PMS1P54277 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.34■■□□□ 1.33
PMS1P54277 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PMS1P54277 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.34■■□□□ 1.33
PMS1P54277 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
PMS1P54277 SUDS3P1-201ENST00000505831 966 ntBASIC23.34■■□□□ 1.33
PMS1P54277 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.34■■□□□ 1.33
PMS1P54277 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.34■■□□□ 1.33
PMS1P54277 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.34■■□□□ 1.33
PMS1P54277 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.34■■□□□ 1.33
PMS1P54277 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
PMS1P54277 RASA4CP-201ENST00000424092 1398 ntBASIC23.34■■□□□ 1.33
PMS1P54277 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PMS1P54277 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.34■■□□□ 1.33
PMS1P54277 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
PMS1P54277 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PMS1P54277 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.33
PMS1P54277 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
PMS1P54277 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PMS1P54277 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PMS1P54277 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PMS1P54277 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.33■■□□□ 1.33
PMS1P54277 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PMS1P54277 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PMS1P54277 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
PMS1P54277 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PMS1P54277 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
PMS1P54277 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PMS1P54277 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PMS1P54277 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PMS1P54277 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PMS1P54277 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PMS1P54277 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PMS1P54277 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PMS1P54277 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PMS1P54277 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PMS1P54277 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.32■■□□□ 1.32
PMS1P54277 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.32■■□□□ 1.32
PMS1P54277 AC091305.1-201ENST00000479476 895 ntBASIC23.32■■□□□ 1.32
PMS1P54277 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PMS1P54277 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
PMS1P54277 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.32■■□□□ 1.32
PMS1P54277 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PMS1P54277 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms