Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 LST7YGR057C 729 nt3.01□□□□□ -1.93
TY1B-HO13535 CPR7YJR032W 1182 nt3.01□□□□□ -1.93
TY1B-HO13535 YML053CYML053C 639 nt3.01□□□□□ -1.93
TY1B-HO13535 YOR238WYOR238W 912 nt3.01□□□□□ -1.93
TY1B-HO13535 DNL4YOR005C 2835 nt3.01□□□□□ -1.93
TY1B-HO13535 PIK1YNL267W 3201 nt3.01□□□□□ -1.93
TY1B-HO13535 YRB30YGL164C 1323 nt3.01□□□□□ -1.93
TY1B-HO13535 MPH1YIR002C 2982 nt3□□□□□ -1.93
TY1B-HO13535 KAP104YBR017C 2757 nt3□□□□□ -1.93
TY1B-HO13535 RBK1YCR036W 1002 nt3□□□□□ -1.93
TY1B-HO13535 COS3YML132W 1140 nt3□□□□□ -1.93
TY1B-HO13535 MAC1YMR021C 1254 nt3□□□□□ -1.93
TY1B-HO13535 YOR292CYOR292C 930 nt3□□□□□ -1.93
TY1B-HO13535 RPS11BYBR048W 471 nt3□□□□□ -1.93
TY1B-HO13535 YBR196C-BYBR196C-B 105 nt3□□□□□ -1.93
TY1B-HO13535 COS2YBR302C 1140 nt3□□□□□ -1.93
TY1B-HO13535 TAF2YCR042C 4224 nt3□□□□□ -1.93
TY1B-HO13535 ARC19YKL013C 516 nt3□□□□□ -1.93
TY1B-HO13535 YNL193WYNL193W 1677 nt2.99□□□□□ -1.93
TY1B-HO13535 SYM1YLR251W 594 nt2.99□□□□□ -1.93
TY1B-HO13535 POC4YPL144W 447 nt2.99□□□□□ -1.93
TY1B-HO13535 BCS1YDR375C 1371 nt2.98□□□□□ -1.93
TY1B-HO13535 DYN1YKR054C 12279 nt2.98□□□□□ -1.93
TY1B-HO13535 YCG1YDR325W 3108 nt2.98□□□□□ -1.93
TY1B-HO13535 YER172C-AYER172C-A 381 nt2.98□□□□□ -1.93
TY1B-HO13535 YPL142CYPL142C 318 nt2.98□□□□□ -1.93
TY1B-HO13535 snR3snR3 194 nt2.98□□□□□ -1.93
TY1B-HO13535 SAP185YJL098W 3177 nt2.98□□□□□ -1.93
TY1B-HO13535 SET2YJL168C 2202 nt2.98□□□□□ -1.93
TY1B-HO13535 YGL101WYGL101W 648 nt2.97□□□□□ -1.93
TY1B-HO13535 AIM19YIL087C 474 nt2.97□□□□□ -1.93
TY1B-HO13535 MRPL38YKL170W 417 nt2.97□□□□□ -1.93
TY1B-HO13535 YPR077CYPR077C 372 nt2.97□□□□□ -1.93
TY1B-HO13535 MET5YJR137C 4329 nt2.97□□□□□ -1.93
TY1B-HO13535 YDR431WYDR431W 312 nt2.97□□□□□ -1.93
TY1B-HO13535 YAE1YJR067C 426 nt2.97□□□□□ -1.93
TY1B-HO13535 RSN1YMR266W 2862 nt2.97□□□□□ -1.93
TY1B-HO13535 ORC4YPR162C 1590 nt2.97□□□□□ -1.93
TY1B-HO13535 NDT80YHR124W 1884 nt2.96□□□□□ -1.93
TY1B-HO13535 TCP1YDR212W 1680 nt2.96□□□□□ -1.94
TY1B-HO13535 YKR015CYKR015C 1707 nt2.96□□□□□ -1.94
TY1B-HO13535 TEC1YBR083W 1461 nt2.96□□□□□ -1.94
TY1B-HO13535 KIN82YCR091W 2163 nt2.96□□□□□ -1.94
TY1B-HO13535 RTN1YDR233C 888 nt2.96□□□□□ -1.94
TY1B-HO13535 YGR226CYGR226C 210 nt2.96□□□□□ -1.94
TY1B-HO13535 YIR017W-AYIR017W-A 600 nt2.96□□□□□ -1.94
TY1B-HO13535 YKR051WYKR051W 1257 nt2.96□□□□□ -1.94
TY1B-HO13535 LAP2YNL045W 2016 nt2.96□□□□□ -1.94
TY1B-HO13535 YGR073CYGR073C 372 nt2.95□□□□□ -1.94
TY1B-HO13535 YGR126WYGR126W 693 nt2.95□□□□□ -1.94
TY1B-HO13535 YHR137C-AYHR137C-A 651 nt2.95□□□□□ -1.94
TY1B-HO13535 CFT1YDR301W 4074 nt2.95□□□□□ -1.94
TY1B-HO13535 TFC1YBR123C 1950 nt2.95□□□□□ -1.94
TY1B-HO13535 ADH4YGL256W 1149 nt2.95□□□□□ -1.94
TY1B-HO13535 YGR168CYGR168C 1131 nt2.95□□□□□ -1.94
TY1B-HO13535 PCL7YIL050W 858 nt2.95□□□□□ -1.94
TY1B-HO13535 YLR365WYLR365W 333 nt2.95□□□□□ -1.94
TY1B-HO13535 SAS2YMR127C 1017 nt2.95□□□□□ -1.94
TY1B-HO13535 YAP7YOL028C 738 nt2.95□□□□□ -1.94
TY1B-HO13535 VAM10YOR068C 345 nt2.95□□□□□ -1.94
TY1B-HO13535 SAK1YER129W 3429 nt2.94□□□□□ -1.94
TY1B-HO13535 TIF4631YGR162W 2859 nt2.94□□□□□ -1.94
TY1B-HO13535 DBP7YKR024C 2229 nt2.94□□□□□ -1.94
TY1B-HO13535 YHL037CYHL037C 402 nt2.94□□□□□ -1.94
TY1B-HO13535 SAC3YDR159W 3906 nt2.94□□□□□ -1.94
TY1B-HO13535 SKN7YHR206W 1869 nt2.94□□□□□ -1.94
TY1B-HO13535 CDC24YAL041W 2565 nt2.93□□□□□ -1.94
TY1B-HO13535 MAK21YDR060W 3078 nt2.93□□□□□ -1.94
TY1B-HO13535 MRE11YMR224C 2079 nt2.93□□□□□ -1.94
TY1B-HO13535 NOP6YDL213C 678 nt2.92□□□□□ -1.94
TY1B-HO13535 GCY1YOR120W 939 nt2.92□□□□□ -1.94
TY1B-HO13535 TRS130YMR218C 3309 nt2.92□□□□□ -1.94
TY1B-HO13535 MLH1YMR167W 2310 nt2.92□□□□□ -1.94
TY1B-HO13535 IZH1YDR492W 951 nt2.92□□□□□ -1.94
TY1B-HO13535 YAL065CYAL065C 387 nt2.92□□□□□ -1.94
TY1B-HO13535 YJL016WYJL016W 1686 nt2.91□□□□□ -1.94
TY1B-HO13535 STU1YBL034C 4542 nt2.91□□□□□ -1.94
TY1B-HO13535 GTR1YML121W 933 nt2.91□□□□□ -1.94
TY1B-HO13535 FOL3YMR113W 1284 nt2.91□□□□□ -1.94
TY1B-HO13535 RCE1YMR274C 948 nt2.91□□□□□ -1.94
TY1B-HO13535 ALG1YBR110W 1350 nt2.9□□□□□ -1.94
TY1B-HO13535 DAS2YDR020C 699 nt2.9□□□□□ -1.94
TY1B-HO13535 YHR086W-AYHR086W-A 162 nt2.9□□□□□ -1.94
TY1B-HO13535 ATP3YBR039W 936 nt2.9□□□□□ -1.94
TY1B-HO13535 TDA3YHR009C 1572 nt2.9□□□□□ -1.94
TY1B-HO13535 LAA1YJL207C 6045 nt2.9□□□□□ -1.95
TY1B-HO13535 CLB4YLR210W 1383 nt2.9□□□□□ -1.95
TY1B-HO13535 STT4YLR305C 5703 nt2.9□□□□□ -1.95
TY1B-HO13535 ERG9YHR190W 1335 nt2.9□□□□□ -1.95
TY1B-HO13535 CUS1YMR240C 1311 nt2.9□□□□□ -1.95
TY1B-HO13535 RPS31YLR167W 459 nt2.89□□□□□ -1.95
TY1B-HO13535 MDV1YJL112W 2145 nt2.89□□□□□ -1.95
TY1B-HO13535 PEX11YOL147C 711 nt2.89□□□□□ -1.95
TY1B-HO13535 CAT8YMR280C 4302 nt2.88□□□□□ -1.95
TY1B-HO13535 MIX14YDR031W 366 nt2.88□□□□□ -1.95
TY1B-HO13535 ARP10YDR106W 855 nt2.88□□□□□ -1.95
TY1B-HO13535 OST6YML019W 999 nt2.88□□□□□ -1.95
TY1B-HO13535 YPR147CYPR147C 915 nt2.88□□□□□ -1.95
TY1B-HO13535 MSH3YCR092C 3057 nt2.88□□□□□ -1.95
TY1B-HO13535 THI22YPR121W 1719 nt2.88□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 35.5 ms