Protein–RNA interactions for Protein: Q9Y5G5

PCDHGA8, Protocadherin gamma-A8, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8Q9Y5G5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA8Q9Y5G5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA8Q9Y5G5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA8Q9Y5G5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA8Q9Y5G5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA8Q9Y5G5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA8Q9Y5G5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHGA8Q9Y5G5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA8Q9Y5G5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA8Q9Y5G5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA8Q9Y5G5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 AC242852.2-201ENST00000615738 1807 ntBASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA8Q9Y5G5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA8Q9Y5G5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHGA8Q9Y5G5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA8Q9Y5G5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA8Q9Y5G5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA8Q9Y5G5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHGA8Q9Y5G5 GPX1P1-201ENST00000388829 606 ntBASIC20.83■□□□□ 0.93
PCDHGA8Q9Y5G5 AC079140.4-201ENST00000507448 529 ntBASIC20.83■□□□□ 0.93
PCDHGA8Q9Y5G5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHGA8Q9Y5G5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHGA8Q9Y5G5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PCDHGA8Q9Y5G5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
PCDHGA8Q9Y5G5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGA8Q9Y5G5 ESRRAP2-201ENST00000418437 1549 ntBASIC20.83■□□□□ 0.92
PCDHGA8Q9Y5G5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 AC004687.1-201ENST00000579003 1625 ntBASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 MIR663A-201ENST00000385250 93 ntBASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PCDHGA8Q9Y5G5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHGA8Q9Y5G5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA8Q9Y5G5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA8Q9Y5G5 AL353803.4-201ENST00000565882 1934 ntBASIC20.8■□□□□ 0.92
PCDHGA8Q9Y5G5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDHGA8Q9Y5G5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA8Q9Y5G5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHGA8Q9Y5G5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGA8Q9Y5G5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGA8Q9Y5G5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGA8Q9Y5G5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA8Q9Y5G5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA8Q9Y5G5 OXCT2P1-201ENST00000447263 1535 ntBASIC20.79■□□□□ 0.92
PCDHGA8Q9Y5G5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA8Q9Y5G5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGA8Q9Y5G5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA8Q9Y5G5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA8Q9Y5G5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHGA8Q9Y5G5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
PCDHGA8Q9Y5G5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDHGA8Q9Y5G5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGA8Q9Y5G5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms