Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.56■□□□□ 0.56
CDH20Q9HBT6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.56■□□□□ 0.56
CDH20Q9HBT6 TPRG1LP1-201ENST00000598702 760 ntBASIC18.56■□□□□ 0.56
CDH20Q9HBT6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH20Q9HBT6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
CDH20Q9HBT6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH20Q9HBT6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH20Q9HBT6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH20Q9HBT6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CDH20Q9HBT6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH20Q9HBT6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH20Q9HBT6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH20Q9HBT6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH20Q9HBT6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH20Q9HBT6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH20Q9HBT6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH20Q9HBT6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH20Q9HBT6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH20Q9HBT6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CDH20Q9HBT6 AP006587.3-201ENST00000525742 1516 ntBASIC18.54■□□□□ 0.56
CDH20Q9HBT6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH20Q9HBT6 FAM99A-202ENST00000538190 1989 ntBASIC18.53■□□□□ 0.56
CDH20Q9HBT6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 MIR935-201ENST00000401179 91 ntBASIC18.53■□□□□ 0.56
CDH20Q9HBT6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 AL024507.2-201ENST00000606070 2574 ntBASIC18.53■□□□□ 0.56
CDH20Q9HBT6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
CDH20Q9HBT6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH20Q9HBT6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH20Q9HBT6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH20Q9HBT6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CDH20Q9HBT6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CDH20Q9HBT6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.52■□□□□ 0.56
CDH20Q9HBT6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH20Q9HBT6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.52■□□□□ 0.56
CDH20Q9HBT6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CDH20Q9HBT6 RARRES2P6-201ENST00000567333 442 ntBASIC18.52■□□□□ 0.56
CDH20Q9HBT6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.52■□□□□ 0.56
CDH20Q9HBT6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CDH20Q9HBT6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDH20Q9HBT6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
CDH20Q9HBT6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 C11orf96-202ENST00000528572 1834 ntBASIC18.51■□□□□ 0.55
CDH20Q9HBT6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 AC097381.1-201ENST00000429019 1296 ntBASIC18.51■□□□□ 0.55
CDH20Q9HBT6 AC079140.4-201ENST00000507448 529 ntBASIC18.51■□□□□ 0.55
CDH20Q9HBT6 CCDC92B-201ENST00000575506 885 ntBASIC18.51■□□□□ 0.55
CDH20Q9HBT6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH20Q9HBT6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms