Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SDF2Q99470 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2Q99470 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2Q99470 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2Q99470 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.68■□□□□ 0.74
SDF2Q99470 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDF2Q99470 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.68■□□□□ 0.74
SDF2Q99470 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.68■□□□□ 0.74
SDF2Q99470 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDF2Q99470 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
SDF2Q99470 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDF2Q99470 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.68■□□□□ 0.74
SDF2Q99470 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.68■□□□□ 0.74
SDF2Q99470 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDF2Q99470 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDF2Q99470 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDF2Q99470 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SDF2Q99470 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.68■□□□□ 0.74
SDF2Q99470 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDF2Q99470 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SDF2Q99470 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDF2Q99470 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SDF2Q99470 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDF2Q99470 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SDF2Q99470 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
SDF2Q99470 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.67■□□□□ 0.74
SDF2Q99470 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDF2Q99470 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.67■□□□□ 0.74
SDF2Q99470 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.67■□□□□ 0.74
SDF2Q99470 AC055733.4-201ENST00000638462 1354 ntBASIC19.67■□□□□ 0.74
SDF2Q99470 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.67■□□□□ 0.74
SDF2Q99470 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDF2Q99470 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDF2Q99470 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.67■□□□□ 0.74
SDF2Q99470 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.67■□□□□ 0.74
SDF2Q99470 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SDF2Q99470 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.66■□□□□ 0.74
SDF2Q99470 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SDF2Q99470 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.66■□□□□ 0.74
SDF2Q99470 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDF2Q99470 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.66■□□□□ 0.74
SDF2Q99470 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDF2Q99470 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.66■□□□□ 0.74
SDF2Q99470 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.66■□□□□ 0.74
SDF2Q99470 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SDF2Q99470 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDF2Q99470 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDF2Q99470 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
SDF2Q99470 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDF2Q99470 AC005224.4-201ENST00000583262 1652 ntBASIC19.65■□□□□ 0.74
SDF2Q99470 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2Q99470 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.65■□□□□ 0.74
SDF2Q99470 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2Q99470 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2Q99470 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2Q99470 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.65■□□□□ 0.74
SDF2Q99470 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SDF2Q99470 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2Q99470 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2Q99470 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2Q99470 AC012414.1-201ENST00000556676 535 ntBASIC19.65■□□□□ 0.74
SDF2Q99470 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.65■□□□□ 0.74
SDF2Q99470 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2Q99470 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2Q99470 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.65■□□□□ 0.74
SDF2Q99470 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2Q99470 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2Q99470 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2Q99470 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SDF2Q99470 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.74
SDF2Q99470 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
SDF2Q99470 MIR638-201ENST00000385237 100 ntBASIC19.64■□□□□ 0.73
SDF2Q99470 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SDF2Q99470 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.64■□□□□ 0.73
SDF2Q99470 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SDF2Q99470 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.64■□□□□ 0.73
SDF2Q99470 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.64■□□□□ 0.73
SDF2Q99470 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SDF2Q99470 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SDF2Q99470 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.64■□□□□ 0.73
SDF2Q99470 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SDF2Q99470 FEM1AP4-201ENST00000443167 1987 ntBASIC19.64■□□□□ 0.73
SDF2Q99470 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.64■□□□□ 0.73
SDF2Q99470 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.64■□□□□ 0.73
SDF2Q99470 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SDF2Q99470 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.64■□□□□ 0.73
SDF2Q99470 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDF2Q99470 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDF2Q99470 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDF2Q99470 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SDF2Q99470 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SDF2Q99470 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDF2Q99470 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDF2Q99470 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
SDF2Q99470 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.63■□□□□ 0.73
SDF2Q99470 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDF2Q99470 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.63■□□□□ 0.73
SDF2Q99470 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.63■□□□□ 0.73
SDF2Q99470 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SDF2Q99470 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms