Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RFX6Q8HWS3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RFX6Q8HWS3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
RFX6Q8HWS3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 AC027682.1-201ENST00000562846 899 ntBASIC22.09■■□□□ 1.13
RFX6Q8HWS3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.09■■□□□ 1.13
RFX6Q8HWS3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.08■■□□□ 1.13
RFX6Q8HWS3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RFX6Q8HWS3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.08■■□□□ 1.13
RFX6Q8HWS3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
RFX6Q8HWS3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RFX6Q8HWS3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RFX6Q8HWS3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.08■■□□□ 1.13
RFX6Q8HWS3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.08■■□□□ 1.13
RFX6Q8HWS3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.08■■□□□ 1.13
RFX6Q8HWS3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.08■■□□□ 1.13
RFX6Q8HWS3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.08■■□□□ 1.13
RFX6Q8HWS3 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.08■■□□□ 1.13
RFX6Q8HWS3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
RFX6Q8HWS3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RFX6Q8HWS3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.08■■□□□ 1.12
RFX6Q8HWS3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.08■■□□□ 1.12
RFX6Q8HWS3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
RFX6Q8HWS3 AC005229.4-201ENST00000610085 2198 ntBASIC22.08■■□□□ 1.12
RFX6Q8HWS3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
RFX6Q8HWS3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
RFX6Q8HWS3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
RFX6Q8HWS3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RFX6Q8HWS3 TSPY26P-201ENST00000476365 1326 ntBASIC22.07■■□□□ 1.12
RFX6Q8HWS3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RFX6Q8HWS3 AC003102.1-202ENST00000563394 1796 ntBASIC22.07■■□□□ 1.12
RFX6Q8HWS3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
RFX6Q8HWS3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RFX6Q8HWS3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
RFX6Q8HWS3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.07■■□□□ 1.12
RFX6Q8HWS3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.07■■□□□ 1.12
RFX6Q8HWS3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.07■■□□□ 1.12
RFX6Q8HWS3 AP001330.3-201ENST00000520123 633 ntBASIC22.07■■□□□ 1.12
RFX6Q8HWS3 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.07■■□□□ 1.12
RFX6Q8HWS3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RFX6Q8HWS3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RFX6Q8HWS3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RFX6Q8HWS3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RFX6Q8HWS3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RFX6Q8HWS3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.07■■□□□ 1.12
RFX6Q8HWS3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX6Q8HWS3 AP006587.3-201ENST00000525742 1516 ntBASIC22.06■■□□□ 1.12
RFX6Q8HWS3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RFX6Q8HWS3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX6Q8HWS3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX6Q8HWS3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX6Q8HWS3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX6Q8HWS3 EDA-201ENST00000338901 1233 ntBASIC22.06■■□□□ 1.12
RFX6Q8HWS3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.06■■□□□ 1.12
RFX6Q8HWS3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.06■■□□□ 1.12
RFX6Q8HWS3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RFX6Q8HWS3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.06■■□□□ 1.12
RFX6Q8HWS3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX6Q8HWS3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.06■■□□□ 1.12
RFX6Q8HWS3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RFX6Q8HWS3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RFX6Q8HWS3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RFX6Q8HWS3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.05■■□□□ 1.12
RFX6Q8HWS3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.05■■□□□ 1.12
RFX6Q8HWS3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.05■■□□□ 1.12
RFX6Q8HWS3 AL355001.2-201ENST00000620617 1191 ntBASIC22.05■■□□□ 1.12
RFX6Q8HWS3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RFX6Q8HWS3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RFX6Q8HWS3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX6Q8HWS3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX6Q8HWS3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.04■■□□□ 1.12
RFX6Q8HWS3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX6Q8HWS3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX6Q8HWS3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX6Q8HWS3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.04■■□□□ 1.12
RFX6Q8HWS3 AF213884.3-201ENST00000563833 479 ntBASIC22.04■■□□□ 1.12
RFX6Q8HWS3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX6Q8HWS3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX6Q8HWS3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.04■■□□□ 1.12
RFX6Q8HWS3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RFX6Q8HWS3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
RFX6Q8HWS3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.03■■□□□ 1.12
RFX6Q8HWS3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
RFX6Q8HWS3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RFX6Q8HWS3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RFX6Q8HWS3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms