Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.61■□□□□ 0.57
CDH20Q9HBT6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH20Q9HBT6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH20Q9HBT6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH20Q9HBT6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH20Q9HBT6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH20Q9HBT6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH20Q9HBT6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH20Q9HBT6 YBX1P1-201ENST00000445822 960 ntBASIC18.6■□□□□ 0.57
CDH20Q9HBT6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.6■□□□□ 0.57
CDH20Q9HBT6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.6■□□□□ 0.57
CDH20Q9HBT6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH20Q9HBT6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH20Q9HBT6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH20Q9HBT6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH20Q9HBT6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH20Q9HBT6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH20Q9HBT6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.58■□□□□ 0.57
CDH20Q9HBT6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH20Q9HBT6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH20Q9HBT6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDH20Q9HBT6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH20Q9HBT6 LINC02228-203ENST00000641970 1355 ntBASIC18.58■□□□□ 0.57
CDH20Q9HBT6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH20Q9HBT6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH20Q9HBT6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH20Q9HBT6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH20Q9HBT6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH20Q9HBT6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH20Q9HBT6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH20Q9HBT6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.56
CDH20Q9HBT6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH20Q9HBT6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CDH20Q9HBT6 AC123595.1-201ENST00000440769 1046 ntBASIC18.58■□□□□ 0.56
CDH20Q9HBT6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH20Q9HBT6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH20Q9HBT6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDH20Q9HBT6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CDH20Q9HBT6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CDH20Q9HBT6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH20Q9HBT6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 AC005224.4-201ENST00000583262 1652 ntBASIC18.57■□□□□ 0.56
CDH20Q9HBT6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH20Q9HBT6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH20Q9HBT6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH20Q9HBT6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH20Q9HBT6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH20Q9HBT6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH20Q9HBT6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH20Q9HBT6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH20Q9HBT6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms