Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NANOGQ9H9S0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NANOGQ9H9S0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NANOGQ9H9S0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
NANOGQ9H9S0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.21■□□□□ 0.83
NANOGQ9H9S0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NANOGQ9H9S0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NANOGQ9H9S0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NANOGQ9H9S0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NANOGQ9H9S0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NANOGQ9H9S0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NANOGQ9H9S0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NANOGQ9H9S0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NANOGQ9H9S0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NANOGQ9H9S0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
NANOGQ9H9S0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.21■□□□□ 0.83
NANOGQ9H9S0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NANOGQ9H9S0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NANOGQ9H9S0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 RARRES2P1-201ENST00000474487 481 ntBASIC20.2■□□□□ 0.82
NANOGQ9H9S0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 MIR6724-1-201ENST00000616420 92 ntBASIC20.2■□□□□ 0.82
NANOGQ9H9S0 MIR6724-2-201ENST00000616483 92 ntBASIC20.2■□□□□ 0.82
NANOGQ9H9S0 MIR6724-4-201ENST00000617390 92 ntBASIC20.2■□□□□ 0.82
NANOGQ9H9S0 MIR6724-3-201ENST00000622482 92 ntBASIC20.2■□□□□ 0.82
NANOGQ9H9S0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 AC068587.7-201ENST00000641602 218 ntBASIC20.2■□□□□ 0.82
NANOGQ9H9S0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NANOGQ9H9S0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NANOGQ9H9S0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.19■□□□□ 0.82
NANOGQ9H9S0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NANOGQ9H9S0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NANOGQ9H9S0 OXCT2P1-201ENST00000447263 1535 ntBASIC20.19■□□□□ 0.82
NANOGQ9H9S0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.19■□□□□ 0.82
NANOGQ9H9S0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
NANOGQ9H9S0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NANOGQ9H9S0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NANOGQ9H9S0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NANOGQ9H9S0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NANOGQ9H9S0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.19■□□□□ 0.82
NANOGQ9H9S0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NANOGQ9H9S0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.19■□□□□ 0.82
NANOGQ9H9S0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NANOGQ9H9S0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
NANOGQ9H9S0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.18■□□□□ 0.82
NANOGQ9H9S0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.18■□□□□ 0.82
NANOGQ9H9S0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGQ9H9S0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGQ9H9S0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.18■□□□□ 0.82
NANOGQ9H9S0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.18■□□□□ 0.82
NANOGQ9H9S0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
NANOGQ9H9S0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
NANOGQ9H9S0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.18■□□□□ 0.82
NANOGQ9H9S0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.18■□□□□ 0.82
NANOGQ9H9S0 LINC01006-201ENST00000333319 2292 ntBASIC20.18■□□□□ 0.82
NANOGQ9H9S0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.18■□□□□ 0.82
NANOGQ9H9S0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NANOGQ9H9S0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NANOGQ9H9S0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.17■□□□□ 0.82
NANOGQ9H9S0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
NANOGQ9H9S0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NANOGQ9H9S0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NANOGQ9H9S0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NANOGQ9H9S0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NANOGQ9H9S0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NANOGQ9H9S0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.16■□□□□ 0.82
NANOGQ9H9S0 AL049796.1-201ENST00000565336 1766 ntBASIC20.16■□□□□ 0.82
NANOGQ9H9S0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.16■□□□□ 0.82
NANOGQ9H9S0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NANOGQ9H9S0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.16■□□□□ 0.82
NANOGQ9H9S0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NANOGQ9H9S0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NANOGQ9H9S0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NANOGQ9H9S0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NANOGQ9H9S0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NANOGQ9H9S0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NANOGQ9H9S0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NANOGQ9H9S0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NANOGQ9H9S0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NANOGQ9H9S0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms