Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.69■□□□□ 0.9
SNAP47Q5SQN1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SNAP47Q5SQN1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 AC011767.1-201ENST00000617410 1153 ntBASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNAP47Q5SQN1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNAP47Q5SQN1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNAP47Q5SQN1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNAP47Q5SQN1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNAP47Q5SQN1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNAP47Q5SQN1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.67■□□□□ 0.9
SNAP47Q5SQN1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNAP47Q5SQN1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNAP47Q5SQN1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNAP47Q5SQN1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNAP47Q5SQN1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.67■□□□□ 0.9
SNAP47Q5SQN1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
SNAP47Q5SQN1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SNAP47Q5SQN1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.66■□□□□ 0.9
SNAP47Q5SQN1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNAP47Q5SQN1 KRT18P11-201ENST00000435214 1283 ntBASIC20.66■□□□□ 0.9
SNAP47Q5SQN1 AC026185.1-201ENST00000445748 174 ntBASIC20.66■□□□□ 0.9
SNAP47Q5SQN1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.66■□□□□ 0.9
SNAP47Q5SQN1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SNAP47Q5SQN1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNAP47Q5SQN1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SNAP47Q5SQN1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SNAP47Q5SQN1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNAP47Q5SQN1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.65■□□□□ 0.9
SNAP47Q5SQN1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.65■□□□□ 0.9
SNAP47Q5SQN1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNAP47Q5SQN1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SNAP47Q5SQN1 LINC00526-201ENST00000581067 1875 ntBASIC20.65■□□□□ 0.9
SNAP47Q5SQN1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNAP47Q5SQN1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.65■□□□□ 0.9
SNAP47Q5SQN1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.65■□□□□ 0.9
SNAP47Q5SQN1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.65■□□□□ 0.9
SNAP47Q5SQN1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNAP47Q5SQN1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNAP47Q5SQN1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNAP47Q5SQN1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNAP47Q5SQN1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNAP47Q5SQN1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SNAP47Q5SQN1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 AC006970.2-201ENST00000450065 779 ntBASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 RAP2CP1-201ENST00000605103 478 ntBASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNAP47Q5SQN1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SNAP47Q5SQN1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 AC055733.4-201ENST00000638462 1354 ntBASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms