Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-2Q9C056 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-2Q9C056 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NKX6-2Q9C056 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-2Q9C056 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-2Q9C056 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-2Q9C056 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.29■□□□□ 0.36
NKX6-2Q9C056 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-2Q9C056 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-2Q9C056 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
NKX6-2Q9C056 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.29■□□□□ 0.36
NKX6-2Q9C056 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 RAP2CP1-202ENST00000605179 643 ntBASIC17.28■□□□□ 0.36
NKX6-2Q9C056 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-2Q9C056 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 Z98882.1-201ENST00000622160 2253 ntBASIC17.27■□□□□ 0.36
NKX6-2Q9C056 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 AC026202.3-201ENST00000600805 1127 ntBASIC17.27■□□□□ 0.36
NKX6-2Q9C056 AC007029.1-201ENST00000604183 313 ntBASIC17.27■□□□□ 0.36
NKX6-2Q9C056 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NKX6-2Q9C056 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NKX6-2Q9C056 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NKX6-2Q9C056 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.27■□□□□ 0.35
NKX6-2Q9C056 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
NKX6-2Q9C056 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NKX6-2Q9C056 ALDH1A3-203ENST00000557963 1670 ntBASIC17.26■□□□□ 0.35
NKX6-2Q9C056 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NKX6-2Q9C056 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.25■□□□□ 0.35
NKX6-2Q9C056 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX6-2Q9C056 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX6-2Q9C056 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX6-2Q9C056 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.25■□□□□ 0.35
NKX6-2Q9C056 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX6-2Q9C056 AL592295.1-201ENST00000400984 884 ntBASIC17.25■□□□□ 0.35
NKX6-2Q9C056 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.25■□□□□ 0.35
NKX6-2Q9C056 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.25■□□□□ 0.35
NKX6-2Q9C056 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NKX6-2Q9C056 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.25■□□□□ 0.35
NKX6-2Q9C056 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NKX6-2Q9C056 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
NKX6-2Q9C056 SMG8-203ENST00000578922 2178 ntBASIC17.25■□□□□ 0.35
NKX6-2Q9C056 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NKX6-2Q9C056 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-2Q9C056 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-2Q9C056 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-2Q9C056 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms