Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC30.41■■■□□ 2.46
LTBP4Q8N2S1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
LTBP4Q8N2S1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
LTBP4Q8N2S1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
LTBP4Q8N2S1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC30.41■■■□□ 2.46
LTBP4Q8N2S1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
LTBP4Q8N2S1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
LTBP4Q8N2S1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC30.41■■■□□ 2.46
LTBP4Q8N2S1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
LTBP4Q8N2S1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
LTBP4Q8N2S1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC30.4■■■□□ 2.46
LTBP4Q8N2S1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC30.4■■■□□ 2.46
LTBP4Q8N2S1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC30.4■■■□□ 2.46
LTBP4Q8N2S1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC30.4■■■□□ 2.46
LTBP4Q8N2S1 HLA-B-256ENST00000639848 1089 ntBASIC30.4■■■□□ 2.46
LTBP4Q8N2S1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
LTBP4Q8N2S1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
LTBP4Q8N2S1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
LTBP4Q8N2S1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
LTBP4Q8N2S1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
LTBP4Q8N2S1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
LTBP4Q8N2S1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC30.39■■■□□ 2.46
LTBP4Q8N2S1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
LTBP4Q8N2S1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
LTBP4Q8N2S1 AL355075.4-201ENST00000554988 638 ntBASIC30.39■■■□□ 2.46
LTBP4Q8N2S1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC30.38■■■□□ 2.45
LTBP4Q8N2S1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
LTBP4Q8N2S1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC30.38■■■□□ 2.45
LTBP4Q8N2S1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
LTBP4Q8N2S1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.38■■■□□ 2.45
LTBP4Q8N2S1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
LTBP4Q8N2S1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
LTBP4Q8N2S1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC30.37■■■□□ 2.45
LTBP4Q8N2S1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
LTBP4Q8N2S1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
LTBP4Q8N2S1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC30.37■■■□□ 2.45
LTBP4Q8N2S1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC30.37■■■□□ 2.45
LTBP4Q8N2S1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC30.37■■■□□ 2.45
LTBP4Q8N2S1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
LTBP4Q8N2S1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
LTBP4Q8N2S1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
LTBP4Q8N2S1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
LTBP4Q8N2S1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
LTBP4Q8N2S1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
LTBP4Q8N2S1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
LTBP4Q8N2S1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC30.36■■■□□ 2.45
LTBP4Q8N2S1 KRT17P3-201ENST00000420566 1262 ntBASIC30.36■■■□□ 2.45
LTBP4Q8N2S1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
LTBP4Q8N2S1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
LTBP4Q8N2S1 POU5F1P4-201ENST00000413175 1085 ntBASIC30.36■■■□□ 2.45
LTBP4Q8N2S1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC30.36■■■□□ 2.45
LTBP4Q8N2S1 EEF1DP3-203ENST00000566025 782 ntBASIC30.36■■■□□ 2.45
LTBP4Q8N2S1 AL049637.2-201ENST00000641778 930 ntBASIC30.36■■■□□ 2.45
LTBP4Q8N2S1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
LTBP4Q8N2S1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
LTBP4Q8N2S1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC30.35■■■□□ 2.45
LTBP4Q8N2S1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC30.35■■■□□ 2.45
LTBP4Q8N2S1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
LTBP4Q8N2S1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC30.34■■■□□ 2.45
LTBP4Q8N2S1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC30.34■■■□□ 2.45
LTBP4Q8N2S1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC30.34■■■□□ 2.45
LTBP4Q8N2S1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC30.34■■■□□ 2.45
LTBP4Q8N2S1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
LTBP4Q8N2S1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
LTBP4Q8N2S1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.34■■■□□ 2.45
LTBP4Q8N2S1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
LTBP4Q8N2S1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
LTBP4Q8N2S1 NME6-213ENST00000451657 871 ntTSL 2 BASIC30.33■■■□□ 2.45
LTBP4Q8N2S1 PNMA6B-201ENST00000538162 1200 ntBASIC30.33■■■□□ 2.45
LTBP4Q8N2S1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC30.33■■■□□ 2.45
LTBP4Q8N2S1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC30.33■■■□□ 2.45
LTBP4Q8N2S1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
LTBP4Q8N2S1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
LTBP4Q8N2S1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC30.33■■■□□ 2.45
LTBP4Q8N2S1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC30.33■■■□□ 2.45
LTBP4Q8N2S1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC30.33■■■□□ 2.45
LTBP4Q8N2S1 AL049597.2-201ENST00000565575 961 ntBASIC30.33■■■□□ 2.45
LTBP4Q8N2S1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
LTBP4Q8N2S1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC30.32■■■□□ 2.44
LTBP4Q8N2S1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
LTBP4Q8N2S1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
LTBP4Q8N2S1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
LTBP4Q8N2S1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
LTBP4Q8N2S1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC30.32■■■□□ 2.44
LTBP4Q8N2S1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
LTBP4Q8N2S1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC30.32■■■□□ 2.44
LTBP4Q8N2S1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
LTBP4Q8N2S1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
LTBP4Q8N2S1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
LTBP4Q8N2S1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
LTBP4Q8N2S1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC30.31■■■□□ 2.44
LTBP4Q8N2S1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
LTBP4Q8N2S1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
LTBP4Q8N2S1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC30.31■■■□□ 2.44
LTBP4Q8N2S1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC30.31■■■□□ 2.44
LTBP4Q8N2S1 PRKY-204ENST00000533551 1019 ntBASIC30.31■■■□□ 2.44
LTBP4Q8N2S1 MIR4785-201ENST00000585005 73 ntBASIC30.31■■■□□ 2.44
LTBP4Q8N2S1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
LTBP4Q8N2S1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC30.3■■■□□ 2.44
LTBP4Q8N2S1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms