Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC135279.3-201ENST00000610945 1311 ntBASIC18.5■□□□□ 0.55
SFTPBP07988 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SFTPBP07988 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SFTPBP07988 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.5■□□□□ 0.55
SFTPBP07988 AC024257.2-201ENST00000549699 147 ntBASIC18.5■□□□□ 0.55
SFTPBP07988 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.5■□□□□ 0.55
SFTPBP07988 AC005837.3-201ENST00000612163 286 ntBASIC18.5■□□□□ 0.55
SFTPBP07988 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SFTPBP07988 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SFTPBP07988 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SFTPBP07988 SYT6-210ENST00000641643 1587 ntBASIC18.5■□□□□ 0.55
SFTPBP07988 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SFTPBP07988 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SFTPBP07988 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SFTPBP07988 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SFTPBP07988 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SFTPBP07988 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SFTPBP07988 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.49■□□□□ 0.55
SFTPBP07988 pRNA.6-201ENST00000610482 90 ntBASIC18.49■□□□□ 0.55
SFTPBP07988 pRNA.5-201ENST00000612139 90 ntBASIC18.49■□□□□ 0.55
SFTPBP07988 pRNA.11-201ENST00000618423 90 ntBASIC18.49■□□□□ 0.55
SFTPBP07988 pRNA.13-201ENST00000619112 90 ntBASIC18.49■□□□□ 0.55
SFTPBP07988 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.49■□□□□ 0.55
SFTPBP07988 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SFTPBP07988 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SFTPBP07988 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SFTPBP07988 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SFTPBP07988 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SFTPBP07988 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.49■□□□□ 0.55
SFTPBP07988 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.49■□□□□ 0.55
SFTPBP07988 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.49■□□□□ 0.55
SFTPBP07988 AC133637.1-201ENST00000624115 1537 ntBASIC18.49■□□□□ 0.55
SFTPBP07988 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SFTPBP07988 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SFTPBP07988 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SFTPBP07988 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SFTPBP07988 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.48■□□□□ 0.55
SFTPBP07988 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SFTPBP07988 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SFTPBP07988 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SFTPBP07988 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SFTPBP07988 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SFTPBP07988 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SFTPBP07988 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SFTPBP07988 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
SFTPBP07988 DUX4L19-201ENST00000557448 1267 ntBASIC18.48■□□□□ 0.55
SFTPBP07988 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SFTPBP07988 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
SFTPBP07988 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.48■□□□□ 0.55
SFTPBP07988 AC092171.4-201ENST00000609130 632 ntBASIC18.48■□□□□ 0.55
SFTPBP07988 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SFTPBP07988 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SFTPBP07988 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SFTPBP07988 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SFTPBP07988 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SFTPBP07988 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.47■□□□□ 0.55
SFTPBP07988 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SFTPBP07988 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SFTPBP07988 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.47■□□□□ 0.55
SFTPBP07988 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SFTPBP07988 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SFTPBP07988 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.47■□□□□ 0.55
SFTPBP07988 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.47■□□□□ 0.55
SFTPBP07988 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.47■□□□□ 0.55
SFTPBP07988 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SFTPBP07988 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.47■□□□□ 0.55
SFTPBP07988 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SFTPBP07988 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SFTPBP07988 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SFTPBP07988 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SFTPBP07988 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.47■□□□□ 0.55
SFTPBP07988 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SFTPBP07988 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.47■□□□□ 0.55
SFTPBP07988 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SFTPBP07988 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SFTPBP07988 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SFTPBP07988 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SFTPBP07988 SLC25A24-204ENST00000569674 2357 ntBASIC18.46■□□□□ 0.55
SFTPBP07988 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
SFTPBP07988 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.46■□□□□ 0.55
SFTPBP07988 SERBP1P1-201ENST00000396021 1160 ntBASIC18.46■□□□□ 0.55
SFTPBP07988 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SFTPBP07988 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.46■□□□□ 0.55
SFTPBP07988 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.46■□□□□ 0.55
SFTPBP07988 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.46■□□□□ 0.55
SFTPBP07988 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.46■□□□□ 0.55
SFTPBP07988 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.46■□□□□ 0.55
SFTPBP07988 AC133561.4-201ENST00000566112 224 ntBASIC18.46■□□□□ 0.55
SFTPBP07988 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SFTPBP07988 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SFTPBP07988 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SFTPBP07988 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SFTPBP07988 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SFTPBP07988 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.45■□□□□ 0.54
SFTPBP07988 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SFTPBP07988 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SFTPBP07988 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SFTPBP07988 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.45■□□□□ 0.54
SFTPBP07988 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SFTPBP07988 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 256 ms