Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PMS1P54277 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.67■■□□□ 1.38
PMS1P54277 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.67■■□□□ 1.38
PMS1P54277 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.67■■□□□ 1.38
PMS1P54277 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.67■■□□□ 1.38
PMS1P54277 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PMS1P54277 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PMS1P54277 Z98882.1-201ENST00000622160 2253 ntBASIC23.67■■□□□ 1.38
PMS1P54277 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.67■■□□□ 1.38
PMS1P54277 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PMS1P54277 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PMS1P54277 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PMS1P54277 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PMS1P54277 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PMS1P54277 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PMS1P54277 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PMS1P54277 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PMS1P54277 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
PMS1P54277 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PMS1P54277 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PMS1P54277 AC024257.2-201ENST00000549699 147 ntBASIC23.66■■□□□ 1.38
PMS1P54277 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.66■■□□□ 1.38
PMS1P54277 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PMS1P54277 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PMS1P54277 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PMS1P54277 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
PMS1P54277 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PMS1P54277 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.65■■□□□ 1.38
PMS1P54277 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
PMS1P54277 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PMS1P54277 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
PMS1P54277 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.65■■□□□ 1.38
PMS1P54277 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PMS1P54277 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.65■■□□□ 1.38
PMS1P54277 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.65■■□□□ 1.38
PMS1P54277 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PMS1P54277 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PMS1P54277 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.65■■□□□ 1.38
PMS1P54277 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.65■■□□□ 1.38
PMS1P54277 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
PMS1P54277 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PMS1P54277 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.64■■□□□ 1.38
PMS1P54277 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PMS1P54277 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.64■■□□□ 1.38
PMS1P54277 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.64■■□□□ 1.38
PMS1P54277 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PMS1P54277 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.64■■□□□ 1.37
PMS1P54277 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.64■■□□□ 1.37
PMS1P54277 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
PMS1P54277 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PMS1P54277 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PMS1P54277 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PMS1P54277 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PMS1P54277 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.64■■□□□ 1.37
PMS1P54277 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.64■■□□□ 1.37
PMS1P54277 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PMS1P54277 AF106564.1-201ENST00000607058 2553 ntBASIC23.63■■□□□ 1.37
PMS1P54277 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PMS1P54277 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PMS1P54277 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PMS1P54277 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PMS1P54277 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PMS1P54277 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PMS1P54277 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PMS1P54277 AL136162.1-201ENST00000607711 1078 ntBASIC23.63■■□□□ 1.37
PMS1P54277 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.63■■□□□ 1.37
PMS1P54277 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.63■■□□□ 1.37
PMS1P54277 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PMS1P54277 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PMS1P54277 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PMS1P54277 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PMS1P54277 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PMS1P54277 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.62■■□□□ 1.37
PMS1P54277 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.62■■□□□ 1.37
PMS1P54277 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.62■■□□□ 1.37
PMS1P54277 BX842568.3-201ENST00000418104 571 ntBASIC23.62■■□□□ 1.37
PMS1P54277 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.62■■□□□ 1.37
PMS1P54277 AC133561.4-201ENST00000566112 224 ntBASIC23.62■■□□□ 1.37
PMS1P54277 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.62■■□□□ 1.37
PMS1P54277 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.62■■□□□ 1.37
PMS1P54277 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.62■■□□□ 1.37
PMS1P54277 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.62■■□□□ 1.37
PMS1P54277 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
PMS1P54277 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.61■■□□□ 1.37
PMS1P54277 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PMS1P54277 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.61■■□□□ 1.37
PMS1P54277 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.61■■□□□ 1.37
PMS1P54277 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PMS1P54277 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.61■■□□□ 1.37
PMS1P54277 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
PMS1P54277 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.61■■□□□ 1.37
PMS1P54277 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.61■■□□□ 1.37
PMS1P54277 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.61■■□□□ 1.37
PMS1P54277 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PMS1P54277 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PMS1P54277 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PMS1P54277 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.61■■□□□ 1.37
PMS1P54277 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PMS1P54277 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PMS1P54277 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms