Protein–RNA interactions for Protein: P25441

RPC53, DNA-directed RNA polymerase III subunit RPC4, yeast

Predictions only

Length 422 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	P25441	PBI1	YPL272C	1554 nt		3.86	□□□□□ -1.79
RPC53	P25441	MPC1	YGL080W	393 nt		3.86	□□□□□ -1.79
RPC53	P25441	ENT3	YJR125C	1227 nt		3.86	□□□□□ -1.79
RPC53	P25441	MBR1	YKL093W	1020 nt		3.86	□□□□□ -1.79
RPC53	P25441	ERP1	YAR002C-A	660 nt		3.86	□□□□□ -1.79
RPC53	P25441	SIC1	YLR079W	855 nt		3.86	□□□□□ -1.79
RPC53	P25441	YMR306C-A	YMR306C-A	390 nt		3.86	□□□□□ -1.79
RPC53	P25441	snR17a	snR17a	333 nt		3.86	□□□□□ -1.79
RPC53	P25441	ATG5	YPL149W	885 nt		3.86	□□□□□ -1.79
RPC53	P25441	FYV5	YCL058C	459 nt		3.86	□□□□□ -1.79
RPC53	P25441	TMA108	YIL137C	2841 nt		3.86	□□□□□ -1.79
RPC53	P25441	ECM18	YDR125C	1362 nt		3.86	□□□□□ -1.79
RPC53	P25441	BCS1	YDR375C	1371 nt		3.86	□□□□□ -1.79
RPC53	P25441	TAF1	YGR274C	3201 nt		3.85	□□□□□ -1.79
RPC53	P25441	CPA2	YJR109C	3357 nt		3.85	□□□□□ -1.79
RPC53	P25441	RNR1	YER070W	2667 nt		3.85	□□□□□ -1.79
RPC53	P25441	NHP10	YDL002C	612 nt		3.85	□□□□□ -1.79
RPC53	P25441	TLG1	YDR468C	675 nt		3.85	□□□□□ -1.79
RPC53	P25441	REH1	YLR387C	1299 nt		3.85	□□□□□ -1.79
RPC53	P25441	SIN4	YNL236W	2925 nt		3.85	□□□□□ -1.79
RPC53	P25441	HDA2	YDR295C	2025 nt		3.84	□□□□□ -1.79
RPC53	P25441	RNH202	YDR279W	1053 nt		3.84	□□□□□ -1.79
RPC53	P25441	YDR340W	YDR340W	303 nt		3.84	□□□□□ -1.79
RPC53	P25441	TAM41	YGR046W	1158 nt		3.84	□□□□□ -1.79
RPC53	P25441	RSM26	YJR101W	801 nt		3.84	□□□□□ -1.79
RPC53	P25441	LDS2	YOL047C	1071 nt		3.84	□□□□□ -1.79
RPC53	P25441	RRP14	YKL082C	1305 nt		3.84	□□□□□ -1.79
RPC53	P25441	ASI1	YMR119W	1875 nt		3.84	□□□□□ -1.8
RPC53	P25441	DAN4	YJR151C	3486 nt		3.83	□□□□□ -1.8
RPC53	P25441	YCR024C-B	YCR024C-B	267 nt		3.83	□□□□□ -1.8
RPC53	P25441	IZH1	YDR492W	951 nt		3.83	□□□□□ -1.8
RPC53	P25441	YGL006W-A	YGL006W-A	111 nt		3.83	□□□□□ -1.8
RPC53	P25441	MTM1	YGR257C	1101 nt		3.83	□□□□□ -1.8
RPC53	P25441	YIL102C-A	YIL102C-A	228 nt		3.83	□□□□□ -1.8
RPC53	P25441	MAK16	YAL025C	921 nt		3.83	□□□□□ -1.8
RPC53	P25441	AHP1	YLR109W	531 nt		3.83	□□□□□ -1.8
RPC53	P25441	IZH4	YOL101C	939 nt		3.83	□□□□□ -1.8
RPC53	P25441	YOR082C	YOR082C	342 nt		3.83	□□□□□ -1.8
RPC53	P25441	YPR078C	YPR078C	1119 nt		3.83	□□□□□ -1.8
RPC53	P25441	CET1	YPL228W	1650 nt		3.83	□□□□□ -1.8
RPC53	P25441	HCA4	YJL033W	2313 nt		3.83	□□□□□ -1.8
RPC53	P25441	YJR061W	YJR061W	2808 nt		3.83	□□□□□ -1.8
RPC53	P25441	GSC2	YGR032W	5688 nt		3.82	□□□□□ -1.8
RPC53	P25441	SYT1	YPR095C	3681 nt		3.82	□□□□□ -1.8
RPC53	P25441	AEP2	YMR282C	1743 nt		3.82	□□□□□ -1.8
RPC53	P25441	HFD1	YMR110C	1599 nt		3.82	□□□□□ -1.8
RPC53	P25441	MTC3	YGL226W	372 nt		3.82	□□□□□ -1.8
RPC53	P25441	SDS3	YIL084C	984 nt		3.82	□□□□□ -1.8
RPC53	P25441	GTT2	YLL060C	702 nt		3.82	□□□□□ -1.8
RPC53	P25441	YAR075W	YAR075W	474 nt		3.82	□□□□□ -1.8
RPC53	P25441	SYC1	YOR179C	567 nt		3.82	□□□□□ -1.8
RPC53	P25441	PLP2	YOR281C	861 nt		3.82	□□□□□ -1.8
RPC53	P25441	SCD6	YPR129W	1050 nt		3.82	□□□□□ -1.8
RPC53	P25441	RAD26	YJR035W	3258 nt		3.82	□□□□□ -1.8
RPC53	P25441	RAD2	YGR258C	3096 nt		3.81	□□□□□ -1.8
RPC53	P25441	ALG8	YOR067C	1734 nt		3.81	□□□□□ -1.8
RPC53	P25441	QRI7	YDL104C	1224 nt		3.81	□□□□□ -1.8
RPC53	P25441	RRP17	YDR412W	708 nt		3.81	□□□□□ -1.8
RPC53	P25441	RPS8B	YER102W	603 nt		3.81	□□□□□ -1.8
RPC53	P25441	KXD1	YGL079W	657 nt		3.81	□□□□□ -1.8
RPC53	P25441	PDX1	YGR193C	1233 nt		3.81	□□□□□ -1.8
RPC53	P25441	PPE1	YHR075C	1203 nt		3.81	□□□□□ -1.8
RPC53	P25441	CFD1	YIL003W	882 nt		3.81	□□□□□ -1.8
RPC53	P25441	RPS8A	YBL072C	603 nt		3.81	□□□□□ -1.8
RPC53	P25441	YNL171C	YNL171C	369 nt		3.81	□□□□□ -1.8
RPC53	P25441	HUB1	YNR032C-A	222 nt		3.81	□□□□□ -1.8
RPC53	P25441	FDH1	YOR388C	1131 nt		3.81	□□□□□ -1.8
RPC53	P25441	YDL199C	YDL199C	2064 nt		3.81	□□□□□ -1.8
RPC53	P25441	MIP6	YHR015W	1980 nt		3.81	□□□□□ -1.8
RPC53	P25441	EBS1	YDR206W	2655 nt		3.81	□□□□□ -1.8
RPC53	P25441	ALA1	YOR335C	2877 nt		3.81	□□□□□ -1.8
RPC53	P25441	XRS2	YDR369C	2565 nt		3.8	□□□□□ -1.8
RPC53	P25441	RPS29B	YDL061C	171 nt		3.8	□□□□□ -1.8
RPC53	P25441	YDR526C	YDR526C	471 nt		3.8	□□□□□ -1.8
RPC53	P25441	SAW1	YAL027W	786 nt		3.8	□□□□□ -1.8
RPC53	P25441	ARC19	YKL013C	516 nt		3.8	□□□□□ -1.8
RPC53	P25441	TIR2	YOR010C	756 nt		3.8	□□□□□ -1.8
RPC53	P25441	MRPL27	YBR282W	441 nt		3.8	□□□□□ -1.8
RPC53	P25441	RAD4	YER162C	2265 nt		3.8	□□□□□ -1.8
RPC53	P25441	MRS2	YOR334W	1413 nt		3.79	□□□□□ -1.8
RPC53	P25441	RPA14	YDR156W	414 nt		3.79	□□□□□ -1.8
RPC53	P25441	YGL063C-A	YGL063C-A	150 nt		3.79	□□□□□ -1.8
RPC53	P25441	GCD14	YJL125C	1152 nt		3.79	□□□□□ -1.8
RPC53	P25441	PBA1	YLR199C	831 nt		3.79	□□□□□ -1.8
RPC53	P25441	CHK1	YBR274W	1584 nt		3.79	□□□□□ -1.8
RPC53	P25441	YLR177W	YLR177W	1887 nt		3.79	□□□□□ -1.8
RPC53	P25441	FRE4	YNR060W	2160 nt		3.79	□□□□□ -1.8
RPC53	P25441	YPR022C	YPR022C	3402 nt		3.79	□□□□□ -1.8
RPC53	P25441	YGL140C	YGL140C	3660 nt		3.79	□□□□□ -1.8
RPC53	P25441	YDR089W	YDR089W	2610 nt		3.78	□□□□□ -1.8
RPC53	P25441	SSM4	YIL030C	3960 nt		3.78	□□□□□ -1.8
RPC53	P25441	URA2	YJL130C	6645 nt		3.78	□□□□□ -1.8
RPC53	P25441	STP1	YDR463W	1560 nt		3.78	□□□□□ -1.8
RPC53	P25441	HIM1	YDR317W	1245 nt		3.78	□□□□□ -1.8
RPC53	P25441	FMP32	YFL046W	624 nt		3.78	□□□□□ -1.8
RPC53	P25441	YIL156W-A	YIL156W-A	402 nt		3.78	□□□□□ -1.8
RPC53	P25441	ECM4	YKR076W	1113 nt		3.78	□□□□□ -1.8
RPC53	P25441	RLP7	YNL002C	969 nt		3.78	□□□□□ -1.8
RPC53	P25441	SSP2	YOR242C	1116 nt		3.78	□□□□□ -1.8
RPC53	P25441	YPR108W-A	YPR108W-A	213 nt		3.78	□□□□□ -1.8

Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms