RNA–Protein interactions for RNA: YBR274W

CHK1, Transcript of Serine/threonine kinase and DNA damage checkpoint effector, yeastyeast

Gene CHK1, Length 1,584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHK1YBR274W MTC1P47018 478 aaKnown RBP12.37□□□□□ -0.43
CHK1YBR274W DRS1P32892 752 aaKnown RBP11.96□□□□□ -0.49
CHK1YBR274W FAP1P53971 965 aa11.04□□□□□ -0.64
CHK1YBR274W PRY3P47033 881 aa10.43□□□□□ -0.74
CHK1YBR274W DIP2Q12220 943 aaPredicted RBP10.35□□□□□ -0.75
CHK1YBR274W ISW2Q08773 1120 aa10.22□□□□□ -0.77
CHK1YBR274W PRI1P10363 409 aa10.2□□□□□ -0.78
CHK1YBR274W BFR2Q06631 534 aaKnown RBP10.15□□□□□ -0.78
CHK1YBR274W AAD16Q02895 342 aa10.09□□□□□ -0.79
CHK1YBR274W RPG1P38249 964 aaKnown RBP10.06□□□□□ -0.8
CHK1YBR274W AVT3P36062 692 aa10.05□□□□□ -0.8
CHK1YBR274W RSE1Q04693 1361 aaKnown RBP9.91□□□□□ -0.82
CHK1YBR274W YCK3P39962 524 aa9.73□□□□□ -0.85
CHK1YBR274W HAA1Q12753 694 aaKnown RBP9.68□□□□□ -0.86
CHK1YBR274W TSR3Q12094 313 aaKnown RBP9.66□□□□□ -0.86
CHK1YBR274W RPL17AP05740 184 aaKnown RBP9.55□□□□□ -0.88
CHK1YBR274W RPL17BP46990 184 aaKnown RBP9.55□□□□□ -0.88
CHK1YBR274W REB1P21538 810 aa9.52□□□□□ -0.89
CHK1YBR274W MRPL32P25348 183 aa9.33□□□□□ -0.92
CHK1YBR274W TFA1P36100 482 aa9.2□□□□□ -0.94
CHK1YBR274W SPT21P35209 758 aa9.12□□□□□ -0.95
CHK1YBR274W YKR023WP36119 530 aaKnown RBP8.93□□□□□ -0.98
CHK1YBR274W RIM101P33400 625 aa8.9□□□□□ -0.98
CHK1YBR274W CDC27P38042 758 aa8.86□□□□□ -0.99
CHK1YBR274W YGL015CP33199 130 aa8.83□□□□□ -1
CHK1YBR274W TFC8Q12308 588 aa8.78□□□□□ -1
CHK1YBR274W HOP09932 586 aa8.77□□□□□ -1.01
CHK1YBR274W DCD1P06773 312 aa8.7□□□□□ -1.02
CHK1YBR274W BUD31P25337 157 aaPredicted RBP8.61□□□□□ -1.03
CHK1YBR274W UBP10P53874 792 aaPredicted RBP8.61□□□□□ -1.03
CHK1YBR274W OXP1P28273 1286 aa8.6□□□□□ -1.03
CHK1YBR274W YIL055CP40523 627 aaKnown RBP8.57□□□□□ -1.04
CHK1YBR274W MAP2P38174 421 aaKnown RBP8.56□□□□□ -1.04
CHK1YBR274W PTP3P40048 928 aa8.53□□□□□ -1.04
CHK1YBR274W BCH2P36122 765 aa8.5□□□□□ -1.05
CHK1YBR274W SCY1P53009 804 aa8.48□□□□□ -1.05
CHK1YBR274W YAH1Q12184 172 aaKnown RBP8.45□□□□□ -1.06
CHK1YBR274W RSM7P47150 247 aa8.39□□□□□ -1.07
CHK1YBR274W SLX5P32828 619 aaKnown RBP8.37□□□□□ -1.07
CHK1YBR274W SSP1P38871 571 aa8.33□□□□□ -1.08
CHK1YBR274W EPS1P40557 701 aa8.33□□□□□ -1.08
CHK1YBR274W BBC1P47068 1157 aa8.31□□□□□ -1.08
CHK1YBR274W TIF4632P39936 914 aaKnown RBP8.31□□□□□ -1.08
CHK1YBR274W YLR271WQ06152 274 aa8.3□□□□□ -1.08
CHK1YBR274W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.29□□□□□ -1.08 RIP-Chip
CHK1YBR274W AI2P03876 854 aa8.28□□□□□ -1.08
CHK1YBR274W BDF1P35817 686 aa8.27□□□□□ -1.09
CHK1YBR274W TGL3P40308 642 aa8.22□□□□□ -1.09
CHK1YBR274W PSD2P53037 1138 aaKnown RBP8.13□□□□□ -1.11
CHK1YBR274W MGA2P40578 1113 aa8.1□□□□□ -1.11
CHK1YBR274W SIS1P25294 352 aaKnown RBP8.09□□□□□ -1.11
CHK1YBR274W CST9Q06032 482 aa8.01□□□□□ -1.13
CHK1YBR274W MRM1P25270 412 aa8.01□□□□□ -1.13
CHK1YBR274W NSR1P27476 414 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
CHK1YBR274W YOR238WQ08634 303 aa7.94□□□□□ -1.14
CHK1YBR274W YAP5P40574 245 aa7.93□□□□□ -1.14
CHK1YBR274W RTG3P38165 486 aa7.89□□□□□ -1.15
CHK1YBR274W UBP9P39967 754 aa7.89□□□□□ -1.15
CHK1YBR274W MST1P07236 462 aa7.88□□□□□ -1.15
CHK1YBR274W YMR1P47147 688 aaKnown RBP RIP-Chip data7.8□□□□□ -1.16not detected
CHK1YBR274W VPS29P38759 282 aa7.79□□□□□ -1.16
CHK1YBR274W RCR1P38212 213 aa7.77□□□□□ -1.17
CHK1YBR274W GTT3P39996 337 aa7.77□□□□□ -1.17
CHK1YBR274W PIB1Q06651 286 aa7.76□□□□□ -1.17
CHK1YBR274W DBP1P24784 617 aaKnown RBP7.75□□□□□ -1.17
CHK1YBR274W YFR006WP43590 535 aa7.71□□□□□ -1.18
CHK1YBR274W YBL029C-AQ3E756 94 aa7.71□□□□□ -1.18
CHK1YBR274W STS1P38637 319 aa7.7□□□□□ -1.18
CHK1YBR274W WSC3Q12215 556 aa7.68□□□□□ -1.18
CHK1YBR274W RAM2P29703 316 aa7.66□□□□□ -1.18
CHK1YBR274W VNX1P42839 908 aa7.65□□□□□ -1.18
CHK1YBR274W MAK11P20484 414 aaKnown RBP7.63□□□□□ -1.19
CHK1YBR274W VMA1P17255 1071 aaKnown RBP7.63□□□□□ -1.19
CHK1YBR274W SPP1Q03012 353 aa7.61□□□□□ -1.19
CHK1YBR274W MSB4Q12317 492 aa7.59□□□□□ -1.2
CHK1YBR274W TIF11P38912 153 aaKnown RBP7.57□□□□□ -1.2
CHK1YBR274W YOL036WQ08206 761 aa7.56□□□□□ -1.2
CHK1YBR274W MIF2P35201 549 aa7.55□□□□□ -1.2
CHK1YBR274W SAM3Q08986 587 aa7.55□□□□□ -1.2
CHK1YBR274W SET4P42948 560 aa7.54□□□□□ -1.2
CHK1YBR274W EAP1P36041 632 aaKnown RBP7.54□□□□□ -1.2
CHK1YBR274W ULI1P43604 169 aa7.52□□□□□ -1.21
CHK1YBR274W COQ8P27697 501 aa7.51□□□□□ -1.21
CHK1YBR274W ABP1P15891 592 aaKnown RBP7.5□□□□□ -1.21
CHK1YBR274W GYP5Q12344 894 aa7.5□□□□□ -1.21
CHK1YBR274W PTC3P34221 468 aaKnown RBP7.46□□□□□ -1.21
CHK1YBR274W EDS1P38073 919 aa7.46□□□□□ -1.21
CHK1YBR274W GRE2Q12068 342 aaKnown RBP7.46□□□□□ -1.22
CHK1YBR274W IOC2Q12072 812 aa7.45□□□□□ -1.22
CHK1YBR274W NOP53Q12080 455 aaKnown RBP7.45□□□□□ -1.22
CHK1YBR274W LDB19Q12502 818 aa7.45□□□□□ -1.22
CHK1YBR274W TRP5P00931 707 aaKnown RBP7.44□□□□□ -1.22
CHK1YBR274W ATH1P48016 1211 aa7.44□□□□□ -1.22
CHK1YBR274W HTA1P04911 132 aaKnown RBP7.43□□□□□ -1.22
CHK1YBR274W HTA2P04912 132 aa7.43□□□□□ -1.22
CHK1YBR274W SET1P38827 1080 aaKnown RBP7.43□□□□□ -1.22
CHK1YBR274W DCW1P36091 449 aa7.42□□□□□ -1.22
CHK1YBR274W GUT1P32190 709 aa7.41□□□□□ -1.22
CHK1YBR274W DMA1P38823 416 aa7.4□□□□□ -1.22
CHK1YBR274W RQC2Q12532 1038 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms