Protein–RNA interactions for Protein: O13549

VPS63, Uncharacterized protein VPS63, yeast

Predictions only

Length 108 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS63	O13549	YGL006W-A	YGL006W-A	111 nt		3.19	□□□□□ -1.9
VPS63	O13549	TYS1	YGR185C	1185 nt		3.19	□□□□□ -1.9
VPS63	O13549	YIL156W-A	YIL156W-A	402 nt		3.19	□□□□□ -1.9
VPS63	O13549	LAC1	YKL008C	1257 nt		3.19	□□□□□ -1.9
VPS63	O13549	SIC1	YLR079W	855 nt		3.19	□□□□□ -1.9
VPS63	O13549	YML116W-A	YML116W-A	303 nt		3.19	□□□□□ -1.9
VPS63	O13549	RUF20	RUF20	443 nt		3.19	□□□□□ -1.9
VPS63	O13549	MVD1	YNR043W	1191 nt		3.19	□□□□□ -1.9
VPS63	O13549	IPI3	YNL182C	1668 nt		3.19	□□□□□ -1.9
VPS63	O13549	ASI1	YMR119W	1875 nt		3.19	□□□□□ -1.9
VPS63	O13549	ABP140	YOR239W	1887 nt		3.19	□□□□□ -1.9
VPS63	O13549	RRI1	YDL216C	1323 nt		3.19	□□□□□ -1.9
VPS63	O13549	NTH1	YDR001C	2256 nt		3.18	□□□□□ -1.9
VPS63	O13549	LCB4	YOR171C	1875 nt		3.18	□□□□□ -1.9
VPS63	O13549	UBC8	YEL012W	657 nt		3.18	□□□□□ -1.9
VPS63	O13549	TAN1	YGL232W	870 nt		3.18	□□□□□ -1.9
VPS63	O13549	PTI1	YGR156W	1278 nt		3.18	□□□□□ -1.9
VPS63	O13549	RPB3	YIL021W	957 nt		3.18	□□□□□ -1.9
VPS63	O13549	YIL024C	YIL024C	570 nt		3.18	□□□□□ -1.9
VPS63	O13549	USB1	YLR132C	873 nt		3.18	□□□□□ -1.9
VPS63	O13549	POP8	YBL018C	402 nt		3.18	□□□□□ -1.9
VPS63	O13549	AAH1	YNL141W	1044 nt		3.18	□□□□□ -1.9
VPS63	O13549	YNL181W	YNL181W	1224 nt		3.18	□□□□□ -1.9
VPS63	O13549	YPL035C	YPL035C	348 nt		3.18	□□□□□ -1.9
VPS63	O13549	CIN1	YOR349W	3045 nt		3.18	□□□□□ -1.9
VPS63	O13549	DUN1	YDL101C	1542 nt		3.18	□□□□□ -1.9
VPS63	O13549	TFB2	YPL122C	1542 nt		3.18	□□□□□ -1.9
VPS63	O13549	SIZ1	YDR409W	2715 nt		3.18	□□□□□ -1.9
VPS63	O13549	JEN1	YKL217W	1851 nt		3.18	□□□□□ -1.9
VPS63	O13549	FAT1	YBR041W	2010 nt		3.17	□□□□□ -1.9
VPS63	O13549	MNL1	YHR204W	2391 nt		3.17	□□□□□ -1.9
VPS63	O13549	HOM2	YDR158W	1098 nt		3.17	□□□□□ -1.9
VPS63	O13549	MAG1	YER142C	891 nt		3.17	□□□□□ -1.9
VPS63	O13549	YHR032C-A	YHR032C-A	120 nt		3.17	□□□□□ -1.9
VPS63	O13549	PAN5	YHR063C	1140 nt		3.17	□□□□□ -1.9
VPS63	O13549	SDP1	YIL113W	630 nt		3.17	□□□□□ -1.9
VPS63	O13549	HIS5	YIL116W	1158 nt		3.17	□□□□□ -1.9
VPS63	O13549	YJR037W	YJR037W	384 nt		3.17	□□□□□ -1.9
VPS63	O13549	YLR042C	YLR042C	486 nt		3.17	□□□□□ -1.9
VPS63	O13549	YLR154W-B	YLR154W-B	165 nt		3.17	□□□□□ -1.9
VPS63	O13549	YLR290C	YLR290C	834 nt		3.17	□□□□□ -1.9
VPS63	O13549	GLO1	YML004C	981 nt		3.17	□□□□□ -1.9
VPS63	O13549	RPS10B	YMR230W	318 nt		3.17	□□□□□ -1.9
VPS63	O13549	TRM112	YNR046W	408 nt		3.17	□□□□□ -1.9
VPS63	O13549	SAS5	YOR213C	747 nt		3.17	□□□□□ -1.9
VPS63	O13549	FIG1	YBR040W	897 nt		3.17	□□□□□ -1.9
VPS63	O13549	YBR053C	YBR053C	1077 nt		3.17	□□□□□ -1.9
VPS63	O13549	ATG5	YPL149W	885 nt		3.17	□□□□□ -1.9
VPS63	O13549	FDH2	YPL275W	711 nt		3.17	□□□□□ -1.9
VPS63	O13549	SUT2	YPR009W	807 nt		3.17	□□□□□ -1.9
VPS63	O13549	CHD1	YER164W	4407 nt		3.16	□□□□□ -1.9
VPS63	O13549	GAC1	YOR178C	2382 nt		3.16	□□□□□ -1.9
VPS63	O13549	MYO5	YMR109W	3660 nt		3.16	□□□□□ -1.9
VPS63	O13549	AHA1	YDR214W	1053 nt		3.16	□□□□□ -1.9
VPS63	O13549	VFA1	YER128W	612 nt		3.16	□□□□□ -1.9
VPS63	O13549	YGR051C	YGR051C	324 nt		3.16	□□□□□ -1.9
VPS63	O13549	SKG1	YKR100C	1068 nt		3.16	□□□□□ -1.9
VPS63	O13549	YPT7	YML001W	627 nt		3.16	□□□□□ -1.9
VPS63	O13549	YMR141C	YMR141C	309 nt		3.16	□□□□□ -1.9
VPS63	O13549	SYC1	YOR179C	567 nt		3.16	□□□□□ -1.9
VPS63	O13549	RPS10A	YOR293W	318 nt		3.16	□□□□□ -1.9
VPS63	O13549	MRP2	YPR166C	348 nt		3.16	□□□□□ -1.9
VPS63	O13549	KIN4	YOR233W	2403 nt		3.16	□□□□□ -1.9
VPS63	O13549	XRS2	YDR369C	2565 nt		3.16	□□□□□ -1.9
VPS63	O13549	MSH2	YOL090W	2895 nt		3.16	□□□□□ -1.9
VPS63	O13549	PDR12	YPL058C	4536 nt		3.16	□□□□□ -1.9
VPS63	O13549	RIT1	YMR283C	1542 nt		3.15	□□□□□ -1.9
VPS63	O13549	YJR030C	YJR030C	2238 nt		3.15	□□□□□ -1.9
VPS63	O13549	TSC13	YDL015C	933 nt		3.15	□□□□□ -1.91
VPS63	O13549	YGR064W	YGR064W	369 nt		3.15	□□□□□ -1.91
VPS63	O13549	YGR161W-C	YGR161W-C	279 nt		3.15	□□□□□ -1.91
VPS63	O13549	YKL162C-A	YKL162C-A	153 nt		3.15	□□□□□ -1.91
VPS63	O13549	COQ9	YLR201C	783 nt		3.15	□□□□□ -1.91
VPS63	O13549	OST6	YML019W	999 nt		3.15	□□□□□ -1.91
VPS63	O13549	YNL184C	YNL184C	327 nt		3.15	□□□□□ -1.91
VPS63	O13549	TUM1	YOR251C	915 nt		3.15	□□□□□ -1.91
VPS63	O13549	LDH1	YBR204C	1128 nt		3.15	□□□□□ -1.91
VPS63	O13549	UBP8	YMR223W	1416 nt		3.15	□□□□□ -1.91
VPS63	O13549	YPS7	YDR349C	1791 nt		3.15	□□□□□ -1.91
VPS63	O13549	MDV1	YJL112W	2145 nt		3.14	□□□□□ -1.91
VPS63	O13549	SMC2	YFR031C	3513 nt		3.14	□□□□□ -1.91
VPS63	O13549	FAR8	YMR029C	1572 nt		3.14	□□□□□ -1.91
VPS63	O13549	HTA1	YDR225W	399 nt		3.14	□□□□□ -1.91
VPS63	O13549	IRC22	YEL001C	678 nt		3.14	□□□□□ -1.91
VPS63	O13549	ARI1	YGL157W	1044 nt		3.14	□□□□□ -1.91
VPS63	O13549	DCG1	YIR030C	735 nt		3.14	□□□□□ -1.91
VPS63	O13549	YBL010C	YBL010C	843 nt		3.14	□□□□□ -1.91
VPS63	O13549	HHF2	YNL030W	312 nt		3.14	□□□□□ -1.91
VPS63	O13549	EAF7	YNL136W	1278 nt		3.14	□□□□□ -1.91
VPS63	O13549	PHO88	YBR106W	567 nt		3.14	□□□□□ -1.91
VPS63	O13549	YDL176W	YDL176W	2127 nt		3.14	□□□□□ -1.91
VPS63	O13549	PKP2	YGL059W	1476 nt		3.14	□□□□□ -1.91
VPS63	O13549	IOC3	YFR013W	2364 nt		3.14	□□□□□ -1.91
VPS63	O13549	SWH1	YAR042W	3567 nt		3.13	□□□□□ -1.91
VPS63	O13549	TFC1	YBR123C	1950 nt		3.13	□□□□□ -1.91
VPS63	O13549	RRG1	YDR065W	1098 nt		3.13	□□□□□ -1.91
VPS63	O13549	RNH202	YDR279W	1053 nt		3.13	□□□□□ -1.91
VPS63	O13549	tL(UAG)J	tL(UAG)J	82 nt		3.13	□□□□□ -1.91
VPS63	O13549	tL(UAG)L1	tL(UAG)L1	82 nt		3.13	□□□□□ -1.91
VPS63	O13549	tL(UAG)L2	tL(UAG)L2	82 nt		3.13	□□□□□ -1.91

Retrieved 100 of 7,029 protein–RNA pairs in 25.5 ms