Protein–RNA interactions for Protein: Q53H54

TRMT12, tRNA wybutosine-synthesizing protein 2 homolog, humanhuman

Known RBP Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT12Q53H54 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRMT12Q53H54 OR7E47P-201ENST00000546390 1422 ntBASIC20.21■□□□□ 0.83
TRMT12Q53H54 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.21■□□□□ 0.83
TRMT12Q53H54 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRMT12Q53H54 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRMT12Q53H54 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRMT12Q53H54 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRMT12Q53H54 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.21■□□□□ 0.83
TRMT12Q53H54 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.21■□□□□ 0.83
TRMT12Q53H54 AC142381.2-201ENST00000566120 298 ntBASIC20.21■□□□□ 0.83
TRMT12Q53H54 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRMT12Q53H54 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TRMT12Q53H54 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TRMT12Q53H54 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRMT12Q53H54 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRMT12Q53H54 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRMT12Q53H54 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRMT12Q53H54 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRMT12Q53H54 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.21■□□□□ 0.83
TRMT12Q53H54 TSPY26P-201ENST00000476365 1326 ntBASIC20.21■□□□□ 0.83
TRMT12Q53H54 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.21■□□□□ 0.83
TRMT12Q53H54 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.21■□□□□ 0.83
TRMT12Q53H54 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRMT12Q53H54 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT12Q53H54 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT12Q53H54 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT12Q53H54 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.2■□□□□ 0.82
TRMT12Q53H54 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
TRMT12Q53H54 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT12Q53H54 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT12Q53H54 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT12Q53H54 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.2■□□□□ 0.82
TRMT12Q53H54 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.2■□□□□ 0.82
TRMT12Q53H54 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT12Q53H54 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT12Q53H54 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.2■□□□□ 0.82
TRMT12Q53H54 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRMT12Q53H54 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TRMT12Q53H54 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT12Q53H54 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
TRMT12Q53H54 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TRMT12Q53H54 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT12Q53H54 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT12Q53H54 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT12Q53H54 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT12Q53H54 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRMT12Q53H54 C11orf96-202ENST00000528572 1834 ntBASIC20.19■□□□□ 0.82
TRMT12Q53H54 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT12Q53H54 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.19■□□□□ 0.82
TRMT12Q53H54 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.19■□□□□ 0.82
TRMT12Q53H54 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT12Q53H54 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
TRMT12Q53H54 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT12Q53H54 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.19■□□□□ 0.82
TRMT12Q53H54 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT12Q53H54 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT12Q53H54 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT12Q53H54 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.18■□□□□ 0.82
TRMT12Q53H54 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRMT12Q53H54 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT12Q53H54 LINC00565-201ENST00000562710 2331 ntBASIC20.18■□□□□ 0.82
TRMT12Q53H54 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.17■□□□□ 0.82
TRMT12Q53H54 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRMT12Q53H54 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRMT12Q53H54 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRMT12Q53H54 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.17■□□□□ 0.82
TRMT12Q53H54 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRMT12Q53H54 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.17■□□□□ 0.82
TRMT12Q53H54 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRMT12Q53H54 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.17■□□□□ 0.82
TRMT12Q53H54 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.17■□□□□ 0.82
TRMT12Q53H54 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.17■□□□□ 0.82
TRMT12Q53H54 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.17■□□□□ 0.82
TRMT12Q53H54 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
TRMT12Q53H54 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRMT12Q53H54 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRMT12Q53H54 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.16■□□□□ 0.82
TRMT12Q53H54 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRMT12Q53H54 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRMT12Q53H54 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRMT12Q53H54 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRMT12Q53H54 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.16■□□□□ 0.82
TRMT12Q53H54 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRMT12Q53H54 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRMT12Q53H54 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRMT12Q53H54 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.16■□□□□ 0.82
TRMT12Q53H54 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRMT12Q53H54 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.16■□□□□ 0.82
TRMT12Q53H54 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.16■□□□□ 0.82
TRMT12Q53H54 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRMT12Q53H54 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRMT12Q53H54 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRMT12Q53H54 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRMT12Q53H54 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
TRMT12Q53H54 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.15■□□□□ 0.82
TRMT12Q53H54 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.15■□□□□ 0.82
TRMT12Q53H54 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.15■□□□□ 0.82
TRMT12Q53H54 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.15■□□□□ 0.82
TRMT12Q53H54 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRMT12Q53H54 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms