Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 YDR417CYDR417C 372 nt5.47□□□□□ -1.53
MSH4P40965 MRP4YHL004W 1185 nt5.47□□□□□ -1.53
MSH4P40965 CIC1YHR052W 1131 nt5.47□□□□□ -1.53
MSH4P40965 IKI1YHR187W 930 nt5.47□□□□□ -1.53
MSH4P40965 YLR154W-FYLR154W-F 141 nt5.47□□□□□ -1.53
MSH4P40965 YLR444CYLR444C 303 nt5.47□□□□□ -1.53
MSH4P40965 ATG5YPL149W 885 nt5.47□□□□□ -1.53
MSH4P40965 YCL068CYCL068C 783 nt5.46□□□□□ -1.54
MSH4P40965 SNU23YDL098C 585 nt5.46□□□□□ -1.54
MSH4P40965 NUS1YDL193W 1128 nt5.46□□□□□ -1.54
MSH4P40965 TAF10YDR167W 621 nt5.46□□□□□ -1.54
MSH4P40965 GLC7YER133W 939 nt5.46□□□□□ -1.54
MSH4P40965 RMR1YGL250W 726 nt5.46□□□□□ -1.54
MSH4P40965 YPT52YKR014C 705 nt5.46□□□□□ -1.54
MSH4P40965 YLR217WYLR217W 324 nt5.46□□□□□ -1.54
MSH4P40965 MCA1YOR197W 1299 nt5.46□□□□□ -1.54
MSH4P40965 YPL034WYPL034W 498 nt5.46□□□□□ -1.54
MSH4P40965 MEI5YPL121C 669 nt5.46□□□□□ -1.54
MSH4P40965 REI1YBR267W 1182 nt5.46□□□□□ -1.54
MSH4P40965 HIR2YOR038C 2628 nt5.45□□□□□ -1.54
MSH4P40965 ECM32YER176W 3366 nt5.45□□□□□ -1.54
MSH4P40965 YDR391CYDR391C 699 nt5.45□□□□□ -1.54
MSH4P40965 SNO3YFL060C 669 nt5.45□□□□□ -1.54
MSH4P40965 PXR1YGR280C 816 nt5.45□□□□□ -1.54
MSH4P40965 COX2Q0250 756 nt5.45□□□□□ -1.54
MSH4P40965 SFT1YKL006C-A 294 nt5.45□□□□□ -1.54
MSH4P40965 YBL059WYBL059W 582 nt5.45□□□□□ -1.54
MSH4P40965 YNL144W-AYNL144W-A 84 nt5.45□□□□□ -1.54
MSH4P40965 SNO2YNL334C 669 nt5.45□□□□□ -1.54
MSH4P40965 RGS2YOR107W 930 nt5.45□□□□□ -1.54
MSH4P40965 YPR169W-AYPR169W-A 219 nt5.45□□□□□ -1.54
MSH4P40965 YPR170W-BYPR170W-B 258 nt5.45□□□□□ -1.54
MSH4P40965 MSA1YOR066W 1890 nt5.45□□□□□ -1.54
MSH4P40965 KCC4YCL024W 3114 nt5.44□□□□□ -1.54
MSH4P40965 ERP3YDL018C 678 nt5.44□□□□□ -1.54
MSH4P40965 DTD1YDL219W 453 nt5.44□□□□□ -1.54
MSH4P40965 IDS2YJL146W 1410 nt5.44□□□□□ -1.54
MSH4P40965 YNK1YKL067W 462 nt5.44□□□□□ -1.54
MSH4P40965 BUD22YMR014W 1560 nt5.44□□□□□ -1.54
MSH4P40965 SSO2YMR183C 888 nt5.44□□□□□ -1.54
MSH4P40965 RNA1YMR235C 1224 nt5.44□□□□□ -1.54
MSH4P40965 YNL057WYNL057W 333 nt5.44□□□□□ -1.54
MSH4P40965 YBL071CYBL071C 309 nt5.44□□□□□ -1.54
MSH4P40965 TRS33YOR115C 807 nt5.44□□□□□ -1.54
MSH4P40965 KRE6YPR159W 2163 nt5.44□□□□□ -1.54
MSH4P40965 MAL12YGR292W 1755 nt5.44□□□□□ -1.54
MSH4P40965 MAL32YBR299W 1755 nt5.44□□□□□ -1.54
MSH4P40965 MNT2YGL257C 1677 nt5.43□□□□□ -1.54
MSH4P40965 RRP3YHR065C 1506 nt5.43□□□□□ -1.54
MSH4P40965 IKS1YJL057C 2004 nt5.43□□□□□ -1.54
MSH4P40965 SYP1YCR030C 2613 nt5.43□□□□□ -1.54
MSH4P40965 YDR248CYDR248C 582 nt5.43□□□□□ -1.54
MSH4P40965 BUD25YER014C-A 462 nt5.43□□□□□ -1.54
MSH4P40965 SPR6YER115C 576 nt5.43□□□□□ -1.54
MSH4P40965 YJL028WYJL028W 336 nt5.43□□□□□ -1.54
MSH4P40965 YJR011CYJR011C 786 nt5.43□□□□□ -1.54
MSH4P40965 COS1YNL336W 1146 nt5.43□□□□□ -1.54
MSH4P40965 SPR2YOR214C 711 nt5.43□□□□□ -1.54
MSH4P40965 ALG14YBR070C 714 nt5.43□□□□□ -1.54
MSH4P40965 CDC28YBR160W 897 nt5.43□□□□□ -1.54
MSH4P40965 MRPL27YBR282W 441 nt5.43□□□□□ -1.54
MSH4P40965 TRM44YPL030W 1704 nt5.43□□□□□ -1.54
MSH4P40965 TDA3YHR009C 1572 nt5.42□□□□□ -1.54
MSH4P40965 PRP28YDR243C 1767 nt5.42□□□□□ -1.54
MSH4P40965 GRX3YDR098C 858 nt5.42□□□□□ -1.54
MSH4P40965 FMP33YJL161W 543 nt5.42□□□□□ -1.54
MSH4P40965 ECI1YLR284C 843 nt5.42□□□□□ -1.54
MSH4P40965 NIS1YNL078W 1224 nt5.42□□□□□ -1.54
MSH4P40965 YCL002CYCL002C 792 nt5.42□□□□□ -1.54
MSH4P40965 GCN20YFR009W 2259 nt5.42□□□□□ -1.54
MSH4P40965 CRT10YOL063C 2874 nt5.42□□□□□ -1.54
MSH4P40965 UBX7YBR273C 1311 nt5.42□□□□□ -1.54
MSH4P40965 YEH2YLR020C 1617 nt5.41□□□□□ -1.54
MSH4P40965 FRE1YLR214W 2061 nt5.41□□□□□ -1.54
MSH4P40965 YCL076WYCL076W 744 nt5.41□□□□□ -1.54
MSH4P40965 TDA5YLR426W 981 nt5.41□□□□□ -1.54
MSH4P40965 RIB4YOL143C 510 nt5.41□□□□□ -1.54
MSH4P40965 MAG2YLR427W 2013 nt5.41□□□□□ -1.54
MSH4P40965 GMC1YDR506C 1827 nt5.41□□□□□ -1.54
MSH4P40965 FMP30YPL103C 1407 nt5.4□□□□□ -1.54
MSH4P40965 DNF2YDR093W 4839 nt5.4□□□□□ -1.54
MSH4P40965 RTC1YOL138C 4026 nt5.4□□□□□ -1.54
MSH4P40965 UBC9YDL064W 474 nt5.4□□□□□ -1.54
MSH4P40965 YDR274CYDR274C 372 nt5.4□□□□□ -1.54
MSH4P40965 YGL242CYGL242C 546 nt5.4□□□□□ -1.54
MSH4P40965 YGR153WYGR153W 654 nt5.4□□□□□ -1.54
MSH4P40965 GTR2YGR163W 1026 nt5.4□□□□□ -1.54
MSH4P40965 YIL025CYIL025C 375 nt5.4□□□□□ -1.54
MSH4P40965 ARC15YIL062C 465 nt5.4□□□□□ -1.54
MSH4P40965 YKL023WYKL023W 834 nt5.4□□□□□ -1.54
MSH4P40965 YAR019W-AYAR019W-A 333 nt5.4□□□□□ -1.54
MSH4P40965 RCN2YOR220W 798 nt5.4□□□□□ -1.54
MSH4P40965 PRM3YPL192C 402 nt5.4□□□□□ -1.54
MSH4P40965 KRE29YER038C 1395 nt5.4□□□□□ -1.55
MSH4P40965 GDE1YPL110C 3672 nt5.39□□□□□ -1.55
MSH4P40965 RCK2YLR248W 1833 nt5.39□□□□□ -1.55
MSH4P40965 YDR018CYDR018C 1191 nt5.39□□□□□ -1.55
MSH4P40965 LPP1YDR503C 825 nt5.39□□□□□ -1.55
MSH4P40965 IRC21YMR073C 606 nt5.39□□□□□ -1.55
MSH4P40965 FMP41YNL168C 780 nt5.39□□□□□ -1.55
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms