RNA–Protein interactions for RNA: YOL143C

RIB4, Transcript of Lumazine synthase (DMRL synthase), yeastyeast

Gene RIB4, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIB4YOL143C MTC1P47018 478 aaKnown RBP12.85□□□□□ -0.35
RIB4YOL143C DRS1P32892 752 aaKnown RBP12.66□□□□□ -0.38
RIB4YOL143C DIP2Q12220 943 aaPredicted RBP10.87□□□□□ -0.67
RIB4YOL143C FAP1P53971 965 aa10.83□□□□□ -0.68
RIB4YOL143C BFR2Q06631 534 aaKnown RBP10.83□□□□□ -0.68
RIB4YOL143C AVT3P36062 692 aa10.67□□□□□ -0.7
RIB4YOL143C PRI1P10363 409 aa10.48□□□□□ -0.73
RIB4YOL143C ISW2Q08773 1120 aa10.47□□□□□ -0.73
RIB4YOL143C RPG1P38249 964 aaKnown RBP10.4□□□□□ -0.74
RIB4YOL143C AAD16Q02895 342 aa10.32□□□□□ -0.76
RIB4YOL143C RSE1Q04693 1361 aaKnown RBP10.3□□□□□ -0.76
RIB4YOL143C PRY3P47033 881 aa10.18□□□□□ -0.78
RIB4YOL143C TFA1P36100 482 aa10.01□□□□□ -0.81
RIB4YOL143C TSR3Q12094 313 aaKnown RBP9.98□□□□□ -0.81
RIB4YOL143C RPL17AP05740 184 aaKnown RBP9.97□□□□□ -0.81
RIB4YOL143C RPL17BP46990 184 aaKnown RBP9.97□□□□□ -0.81
RIB4YOL143C REB1P21538 810 aa9.83□□□□□ -0.84
RIB4YOL143C YCK3P39962 524 aa9.71□□□□□ -0.86
RIB4YOL143C SPT21P35209 758 aa9.6□□□□□ -0.87
RIB4YOL143C HAA1Q12753 694 aaKnown RBP9.53□□□□□ -0.88
RIB4YOL143C MRPL32P25348 183 aa9.51□□□□□ -0.89
RIB4YOL143C RIM101P33400 625 aa9.39□□□□□ -0.91
RIB4YOL143C YKR023WP36119 530 aaKnown RBP9.36□□□□□ -0.91
RIB4YOL143C CDC27P38042 758 aa9.24□□□□□ -0.93
RIB4YOL143C HOP09932 586 aa9.18□□□□□ -0.94
RIB4YOL143C DCD1P06773 312 aa9.14□□□□□ -0.95
RIB4YOL143C OXP1P28273 1286 aa9.14□□□□□ -0.95
RIB4YOL143C TFC8Q12308 588 aa9.14□□□□□ -0.95
RIB4YOL143C YAH1Q12184 172 aaKnown RBP8.95□□□□□ -0.98
RIB4YOL143C YGL015CP33199 130 aa8.93□□□□□ -0.98
RIB4YOL143C PTP3P40048 928 aa8.93□□□□□ -0.98
RIB4YOL143C YIL055CP40523 627 aaKnown RBP8.92□□□□□ -0.98
RIB4YOL143C BCH2P36122 765 aa8.88□□□□□ -0.99
RIB4YOL143C MAP2P38174 421 aaKnown RBP8.85□□□□□ -0.99
RIB4YOL143C SSP1P38871 571 aa8.84□□□□□ -0.99
RIB4YOL143C YLR271WQ06152 274 aa8.83□□□□□ -1
RIB4YOL143C RSM7P47150 247 aa8.81□□□□□ -1
RIB4YOL143C SCY1P53009 804 aa8.79□□□□□ -1
RIB4YOL143C UBP10P53874 792 aaPredicted RBP8.79□□□□□ -1
RIB4YOL143C AI2P03876 854 aa8.7□□□□□ -1.02
RIB4YOL143C EPS1P40557 701 aa8.7□□□□□ -1.02
RIB4YOL143C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
RIB4YOL143C BDF1P35817 686 aa8.65□□□□□ -1.02
RIB4YOL143C BBC1P47068 1157 aa8.6□□□□□ -1.03
RIB4YOL143C PSD2P53037 1138 aaKnown RBP8.6□□□□□ -1.03
RIB4YOL143C SLX5P32828 619 aaKnown RBP8.59□□□□□ -1.03
RIB4YOL143C CST9Q06032 482 aa8.56□□□□□ -1.04
RIB4YOL143C MGA2P40578 1113 aa8.54□□□□□ -1.04
RIB4YOL143C MRM1P25270 412 aa8.42□□□□□ -1.06
RIB4YOL143C TIF4632P39936 914 aaKnown RBP8.41□□□□□ -1.06
RIB4YOL143C TGL3P40308 642 aa8.39□□□□□ -1.07
RIB4YOL143C RCR1P38212 213 aa8.3□□□□□ -1.08
RIB4YOL143C RTG3P38165 486 aa8.25□□□□□ -1.09
RIB4YOL143C VPS29P38759 282 aa8.23□□□□□ -1.09
RIB4YOL143C RAM2P29703 316 aa8.2□□□□□ -1.1
RIB4YOL143C NSR1P27476 414 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
RIB4YOL143C DMA1P38823 416 aa8.17□□□□□ -1.1
RIB4YOL143C YAP5P40574 245 aa8.16□□□□□ -1.1
RIB4YOL143C PIB1Q06651 286 aa8.15□□□□□ -1.1
RIB4YOL143C STS1P38637 319 aa8.14□□□□□ -1.11
RIB4YOL143C YOR238WQ08634 303 aa8.14□□□□□ -1.11
RIB4YOL143C YFR006WP43590 535 aa8.13□□□□□ -1.11
RIB4YOL143C YMR1P47147 688 aaKnown RBP RIP-Chip data8.13□□□□□ -1.11not detected
RIB4YOL143C MST1P07236 462 aa8.12□□□□□ -1.11
RIB4YOL143C DBP1P24784 617 aaKnown RBP8.11□□□□□ -1.11
RIB4YOL143C RQC2Q12532 1038 aaKnown RBP8.05□□□□□ -1.12
RIB4YOL143C MAK11P20484 414 aaKnown RBP8.04□□□□□ -1.12
RIB4YOL143C VMA1P17255 1071 aaKnown RBP7.97□□□□□ -1.13
RIB4YOL143C COQ8P27697 501 aa7.95□□□□□ -1.14
RIB4YOL143C MIF2P35201 549 aa7.95□□□□□ -1.14
RIB4YOL143C EDS1P38073 919 aa7.95□□□□□ -1.14
RIB4YOL143C GTT3P39996 337 aa7.95□□□□□ -1.14
RIB4YOL143C YBL029C-AQ3E756 94 aa7.93□□□□□ -1.14
RIB4YOL143C SET1P38827 1080 aaKnown RBP7.92□□□□□ -1.14
RIB4YOL143C WSC3Q12215 556 aa7.92□□□□□ -1.14
RIB4YOL143C BUD31P25337 157 aaPredicted RBP7.91□□□□□ -1.14
RIB4YOL143C UBP9P39967 754 aa7.89□□□□□ -1.15
RIB4YOL143C SAM3Q08986 587 aa7.88□□□□□ -1.15
RIB4YOL143C PTC3P34221 468 aaKnown RBP7.86□□□□□ -1.15
RIB4YOL143C VNX1P42839 908 aa7.86□□□□□ -1.15
RIB4YOL143C YOL036WQ08206 761 aa7.85□□□□□ -1.15
RIB4YOL143C SET4P42948 560 aa7.84□□□□□ -1.15
RIB4YOL143C GYP5Q12344 894 aa7.81□□□□□ -1.16
RIB4YOL143C NOP53Q12080 455 aaKnown RBP7.79□□□□□ -1.16
RIB4YOL143C SAS10Q12136 610 aaPredicted RBP7.79□□□□□ -1.16
RIB4YOL143C GRE2Q12068 342 aaKnown RBP7.78□□□□□ -1.16
RIB4YOL143C SPP1Q03012 353 aa7.77□□□□□ -1.17
RIB4YOL143C DCW1P36091 449 aa7.76□□□□□ -1.17
RIB4YOL143C YPR148CQ06523 435 aa7.76□□□□□ -1.17
RIB4YOL143C MSB4Q12317 492 aa7.76□□□□□ -1.17
RIB4YOL143C TIF11P38912 153 aaKnown RBP7.75□□□□□ -1.17
RIB4YOL143C ATH1P48016 1211 aa7.75□□□□□ -1.17
RIB4YOL143C GUT1P32190 709 aa7.73□□□□□ -1.17
RIB4YOL143C VPS70P47161 811 aa7.73□□□□□ -1.17
RIB4YOL143C ULI1P43604 169 aa7.72□□□□□ -1.17
RIB4YOL143C TRP5P00931 707 aaKnown RBP7.71□□□□□ -1.18
RIB4YOL143C SOL3P38858 249 aa7.7□□□□□ -1.18
RIB4YOL143C IFH1P39520 1085 aa7.7□□□□□ -1.18
RIB4YOL143C IOC2Q12072 812 aa7.69□□□□□ -1.18
RIB4YOL143C HTA1P04911 132 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms