Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CCL2P13500 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CCL2P13500 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.83■□□□□ 0.61
CCL2P13500 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL2P13500 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCL2P13500 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCL2P13500 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.83■□□□□ 0.6
CCL2P13500 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL2P13500 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL2P13500 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.83■□□□□ 0.6
CCL2P13500 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCL2P13500 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL2P13500 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL2P13500 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCL2P13500 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.82■□□□□ 0.6
CCL2P13500 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL2P13500 AC242852.2-201ENST00000615738 1807 ntBASIC18.82■□□□□ 0.6
CCL2P13500 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.82■□□□□ 0.6
CCL2P13500 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL2P13500 ZNRF2P3-201ENST00000424200 374 ntBASIC18.82■□□□□ 0.6
CCL2P13500 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL2P13500 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.82■□□□□ 0.6
CCL2P13500 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.82■□□□□ 0.6
CCL2P13500 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.82■□□□□ 0.6
CCL2P13500 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCL2P13500 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.82■□□□□ 0.6
CCL2P13500 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.82■□□□□ 0.6
CCL2P13500 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCL2P13500 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL2P13500 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL2P13500 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL2P13500 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL2P13500 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.81■□□□□ 0.6
CCL2P13500 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL2P13500 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL2P13500 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CCL2P13500 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.81■□□□□ 0.6
CCL2P13500 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL2P13500 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.81■□□□□ 0.6
CCL2P13500 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.81■□□□□ 0.6
CCL2P13500 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.81■□□□□ 0.6
CCL2P13500 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCL2P13500 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL2P13500 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.81■□□□□ 0.6
CCL2P13500 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.81■□□□□ 0.6
CCL2P13500 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL2P13500 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL2P13500 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL2P13500 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.8■□□□□ 0.6
CCL2P13500 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL2P13500 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCL2P13500 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL2P13500 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL2P13500 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL2P13500 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL2P13500 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL2P13500 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL2P13500 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL2P13500 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL2P13500 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL2P13500 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.8■□□□□ 0.6
CCL2P13500 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL2P13500 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCL2P13500 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.79■□□□□ 0.6
CCL2P13500 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL2P13500 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL2P13500 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL2P13500 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL2P13500 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.79■□□□□ 0.6
CCL2P13500 OR7E47P-201ENST00000546390 1422 ntBASIC18.79■□□□□ 0.6
CCL2P13500 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.79■□□□□ 0.6
CCL2P13500 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL2P13500 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCL2P13500 AC019069.1-201ENST00000610008 1333 ntBASIC18.78■□□□□ 0.6
CCL2P13500 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCL2P13500 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL2P13500 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCL2P13500 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCL2P13500 IRS3P-201ENST00000223076 1006 ntBASIC18.78■□□□□ 0.6
CCL2P13500 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.78■□□□□ 0.6
CCL2P13500 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL2P13500 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.78■□□□□ 0.6
CCL2P13500 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.78■□□□□ 0.6
CCL2P13500 AC105233.4-201ENST00000642045 216 ntBASIC18.78■□□□□ 0.6
CCL2P13500 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL2P13500 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCL2P13500 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCL2P13500 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL2P13500 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
CCL2P13500 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCL2P13500 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCL2P13500 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL2P13500 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL2P13500 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.77■□□□□ 0.6
CCL2P13500 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL2P13500 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCL2P13500 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCL2P13500 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL2P13500 MIR572-201ENST00000384983 95 ntBASIC18.77■□□□□ 0.6
CCL2P13500 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms