Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL1A2P08123 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL1A2P08123 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL1A2P08123 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL1A2P08123 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL1A2P08123 BID-214ENST00000617586 542 ntTSL 5 BASIC23.86■■□□□ 1.41
COL1A2P08123 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.86■■□□□ 1.41
COL1A2P08123 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL1A2P08123 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL1A2P08123 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL1A2P08123 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
COL1A2P08123 ESRRAP2-201ENST00000418437 1549 ntBASIC23.85■■□□□ 1.41
COL1A2P08123 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A2P08123 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A2P08123 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A2P08123 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A2P08123 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A2P08123 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.85■■□□□ 1.41
COL1A2P08123 AC104187.1-201ENST00000607510 612 ntBASIC23.85■■□□□ 1.41
COL1A2P08123 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A2P08123 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A2P08123 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
COL1A2P08123 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A2P08123 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A2P08123 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A2P08123 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A2P08123 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A2P08123 AC137767.1-201ENST00000602918 1920 ntBASIC23.84■■□□□ 1.41
COL1A2P08123 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A2P08123 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A2P08123 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
COL1A2P08123 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A2P08123 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A2P08123 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A2P08123 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A2P08123 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
COL1A2P08123 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.84■■□□□ 1.41
COL1A2P08123 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A2P08123 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A2P08123 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL1A2P08123 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
COL1A2P08123 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL1A2P08123 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL1A2P08123 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.83■■□□□ 1.41
COL1A2P08123 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL1A2P08123 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.83■■□□□ 1.41
COL1A2P08123 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.83■■□□□ 1.41
COL1A2P08123 RAP2CP1-201ENST00000605103 478 ntBASIC23.83■■□□□ 1.41
COL1A2P08123 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.83■■□□□ 1.41
COL1A2P08123 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL1A2P08123 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
COL1A2P08123 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.82■■□□□ 1.4
COL1A2P08123 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL1A2P08123 AC073111.5-205ENST00000641717 521 ntBASIC23.82■■□□□ 1.4
COL1A2P08123 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
COL1A2P08123 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL1A2P08123 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL1A2P08123 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
COL1A2P08123 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL1A2P08123 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL1A2P08123 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL1A2P08123 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL1A2P08123 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL1A2P08123 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.81■■□□□ 1.4
COL1A2P08123 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL1A2P08123 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
COL1A2P08123 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL1A2P08123 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
COL1A2P08123 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL1A2P08123 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL1A2P08123 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
COL1A2P08123 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL1A2P08123 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL1A2P08123 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL1A2P08123 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
COL1A2P08123 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
COL1A2P08123 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
COL1A2P08123 AP006587.3-201ENST00000525742 1516 ntBASIC23.8■■□□□ 1.4
COL1A2P08123 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.8■■□□□ 1.4
COL1A2P08123 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL1A2P08123 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL1A2P08123 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL1A2P08123 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.8■■□□□ 1.4
COL1A2P08123 CDCA4P2-201ENST00000441182 718 ntBASIC23.79■■□□□ 1.4
COL1A2P08123 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL1A2P08123 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.79■■□□□ 1.4
COL1A2P08123 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL1A2P08123 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.79■■□□□ 1.4
COL1A2P08123 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL1A2P08123 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL1A2P08123 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.78■■□□□ 1.4
COL1A2P08123 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
COL1A2P08123 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL1A2P08123 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.78■■□□□ 1.4
COL1A2P08123 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL1A2P08123 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL1A2P08123 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL1A2P08123 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL1A2P08123 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.78■■□□□ 1.4
COL1A2P08123 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms