Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CAPNS1P04632 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CAPNS1P04632 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CAPNS1P04632 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.47■■□□□ 1.03
CAPNS1P04632 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CAPNS1P04632 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CAPNS1P04632 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CAPNS1P04632 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CAPNS1P04632 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CAPNS1P04632 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.46■■□□□ 1.03
CAPNS1P04632 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.46■■□□□ 1.03
CAPNS1P04632 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CAPNS1P04632 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.46■■□□□ 1.03
CAPNS1P04632 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CAPNS1P04632 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
CAPNS1P04632 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.46■■□□□ 1.03
CAPNS1P04632 NCF1B-203ENST00000435988 1254 ntBASIC21.46■■□□□ 1.03
CAPNS1P04632 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.46■■□□□ 1.03
CAPNS1P04632 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
CAPNS1P04632 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPNS1P04632 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CAPNS1P04632 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.45■■□□□ 1.02
CAPNS1P04632 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPNS1P04632 TSPY20P-201ENST00000450910 630 ntBASIC21.45■■□□□ 1.02
CAPNS1P04632 CD99P1-205ENST00000527459 561 ntBASIC21.45■■□□□ 1.02
CAPNS1P04632 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.45■■□□□ 1.02
CAPNS1P04632 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CAPNS1P04632 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPNS1P04632 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPNS1P04632 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CAPNS1P04632 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPNS1P04632 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.45■■□□□ 1.02
CAPNS1P04632 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.45■■□□□ 1.02
CAPNS1P04632 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPNS1P04632 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPNS1P04632 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CAPNS1P04632 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CAPNS1P04632 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.44■■□□□ 1.02
CAPNS1P04632 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPNS1P04632 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPNS1P04632 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.44■■□□□ 1.02
CAPNS1P04632 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.44■■□□□ 1.02
CAPNS1P04632 pRNA.6-201ENST00000610482 90 ntBASIC21.44■■□□□ 1.02
CAPNS1P04632 pRNA.5-201ENST00000612139 90 ntBASIC21.44■■□□□ 1.02
CAPNS1P04632 pRNA.11-201ENST00000618423 90 ntBASIC21.44■■□□□ 1.02
CAPNS1P04632 pRNA.13-201ENST00000619112 90 ntBASIC21.44■■□□□ 1.02
CAPNS1P04632 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CAPNS1P04632 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPNS1P04632 AC242852.2-201ENST00000615738 1807 ntBASIC21.43■■□□□ 1.02
CAPNS1P04632 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.43■■□□□ 1.02
CAPNS1P04632 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.43■■□□□ 1.02
CAPNS1P04632 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.43■■□□□ 1.02
CAPNS1P04632 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CAPNS1P04632 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPNS1P04632 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CAPNS1P04632 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CAPNS1P04632 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.43■■□□□ 1.02
CAPNS1P04632 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CAPNS1P04632 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPNS1P04632 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CAPNS1P04632 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CAPNS1P04632 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPNS1P04632 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPNS1P04632 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPNS1P04632 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPNS1P04632 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.43■■□□□ 1.02
CAPNS1P04632 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CAPNS1P04632 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CAPNS1P04632 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPNS1P04632 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPNS1P04632 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CAPNS1P04632 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.42■■□□□ 1.02
CAPNS1P04632 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.42■■□□□ 1.02
CAPNS1P04632 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.42■■□□□ 1.02
CAPNS1P04632 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.42■■□□□ 1.02
CAPNS1P04632 AL499627.2-201ENST00000606283 725 ntBASIC21.42■■□□□ 1.02
CAPNS1P04632 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CAPNS1P04632 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPNS1P04632 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPNS1P04632 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPNS1P04632 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPNS1P04632 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.42■■□□□ 1.02
CAPNS1P04632 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CAPNS1P04632 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.41■■□□□ 1.02
CAPNS1P04632 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.41■■□□□ 1.02
CAPNS1P04632 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CAPNS1P04632 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CAPNS1P04632 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.41■■□□□ 1.02
CAPNS1P04632 AL137060.1-201ENST00000618151 2648 ntBASIC21.41■■□□□ 1.02
CAPNS1P04632 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CAPNS1P04632 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CAPNS1P04632 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.41■■□□□ 1.02
CAPNS1P04632 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.41■■□□□ 1.02
CAPNS1P04632 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CAPNS1P04632 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CAPNS1P04632 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPNS1P04632 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CAPNS1P04632 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.4■■□□□ 1.02
CAPNS1P04632 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.4■■□□□ 1.02
CAPNS1P04632 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms