Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 AC079834.2-201ENST00000609776 1949 ntBASIC18.17■□□□□ 0.5
TFF1P04155 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TFF1P04155 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TFF1P04155 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TFF1P04155 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.17■□□□□ 0.5
TFF1P04155 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.17■□□□□ 0.5
TFF1P04155 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.17■□□□□ 0.5
TFF1P04155 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TFF1P04155 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.17■□□□□ 0.5
TFF1P04155 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TFF1P04155 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TFF1P04155 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TFF1P04155 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TFF1P04155 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TFF1P04155 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.16■□□□□ 0.5
TFF1P04155 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
TFF1P04155 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.16■□□□□ 0.5
TFF1P04155 AC079089.2-201ENST00000531211 1277 ntBASIC18.16■□□□□ 0.5
TFF1P04155 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TFF1P04155 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TFF1P04155 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TFF1P04155 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TFF1P04155 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
TFF1P04155 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TFF1P04155 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TFF1P04155 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TFF1P04155 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TFF1P04155 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TFF1P04155 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TFF1P04155 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TFF1P04155 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TFF1P04155 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TFF1P04155 AC092053.2-201ENST00000640557 1818 ntBASIC18.15■□□□□ 0.5
TFF1P04155 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TFF1P04155 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.15■□□□□ 0.5
TFF1P04155 AP005435.1-201ENST00000529293 1178 ntBASIC18.15■□□□□ 0.5
TFF1P04155 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.15■□□□□ 0.5
TFF1P04155 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TFF1P04155 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TFF1P04155 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TFF1P04155 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.15■□□□□ 0.5
TFF1P04155 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TFF1P04155 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TFF1P04155 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.15■□□□□ 0.5
TFF1P04155 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.15■□□□□ 0.5
TFF1P04155 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.14■□□□□ 0.5
TFF1P04155 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
TFF1P04155 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TFF1P04155 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TFF1P04155 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TFF1P04155 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.14■□□□□ 0.49
TFF1P04155 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TFF1P04155 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.14■□□□□ 0.49
TFF1P04155 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TFF1P04155 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.14■□□□□ 0.49
TFF1P04155 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.14■□□□□ 0.49
TFF1P04155 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.14■□□□□ 0.49
TFF1P04155 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TFF1P04155 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.14■□□□□ 0.49
TFF1P04155 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TFF1P04155 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.14■□□□□ 0.49
TFF1P04155 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TFF1P04155 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TFF1P04155 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.14■□□□□ 0.49
TFF1P04155 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.13■□□□□ 0.49
TFF1P04155 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TFF1P04155 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TFF1P04155 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TFF1P04155 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TFF1P04155 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TFF1P04155 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TFF1P04155 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TFF1P04155 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TFF1P04155 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TFF1P04155 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TFF1P04155 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TFF1P04155 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.13■□□□□ 0.49
TFF1P04155 AC091305.1-201ENST00000479476 895 ntBASIC18.13■□□□□ 0.49
TFF1P04155 IGHV3-19-201ENST00000521488 291 ntBASIC18.13■□□□□ 0.49
TFF1P04155 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.13■□□□□ 0.49
TFF1P04155 AC133561.4-201ENST00000566112 224 ntBASIC18.13■□□□□ 0.49
TFF1P04155 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.13■□□□□ 0.49
TFF1P04155 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.13■□□□□ 0.49
TFF1P04155 AC087239.1-201ENST00000622671 572 ntBASIC18.13■□□□□ 0.49
TFF1P04155 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TFF1P04155 RASA4CP-201ENST00000424092 1398 ntBASIC18.13■□□□□ 0.49
TFF1P04155 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
TFF1P04155 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TFF1P04155 OXCT2P1-201ENST00000447263 1535 ntBASIC18.13■□□□□ 0.49
TFF1P04155 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TFF1P04155 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TFF1P04155 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TFF1P04155 AC026471.6-201ENST00000622954 1905 ntBASIC18.12■□□□□ 0.49
TFF1P04155 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TFF1P04155 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TFF1P04155 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.12■□□□□ 0.49
TFF1P04155 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.12■□□□□ 0.49
TFF1P04155 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.12■□□□□ 0.49
TFF1P04155 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TFF1P04155 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms