Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 AL138724.1-201ENST00000606771 1088 ntBASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
TRGV1A0A0A0MS02 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 AC139530.1-201ENST00000575312 1977 ntBASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 AC087239.1-201ENST00000622671 572 ntBASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 AC137767.1-201ENST00000602918 1920 ntBASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV1A0A0A0MS02 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 OR2I1P-207ENST00000453522 948 ntBASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV1A0A0A0MS02 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 CA15P2-201ENST00000611168 834 ntBASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 AC011298.3-201ENST00000615796 283 ntBASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV1A0A0A0MS02 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 LINC00565-201ENST00000562710 2331 ntBASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 AC136469.2-201ENST00000623944 1028 ntBASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 AC068587.7-201ENST00000641602 218 ntBASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.61■□□□□ 0.09
TRGV1A0A0A0MS02 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms