Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 YCL074WYCL074W 927 nt10.54□□□□□ -0.72
VPS3P23643 AQY2YLL052C 450 nt10.54□□□□□ -0.72
VPS3P23643 SHH4YLR164W 507 nt10.54□□□□□ -0.72
VPS3P23643 RPS14BYJL191W 417 nt10.53□□□□□ -0.72
VPS3P23643 UTH1YKR042W 1098 nt10.53□□□□□ -0.72
VPS3P23643 LSC2YGR244C 1284 nt10.52□□□□□ -0.73
VPS3P23643 YML089CYML089C 369 nt10.52□□□□□ -0.73
VPS3P23643 POM34YLR018C 900 nt10.51□□□□□ -0.73
VPS3P23643 SDH5YOL071W 489 nt10.5□□□□□ -0.73
VPS3P23643 TOM6YOR045W 186 nt10.5□□□□□ -0.73
VPS3P23643 RDN18-1RDN18-1 1800 nt10.48□□□□□ -0.73
VPS3P23643 RDN18-2RDN18-2 1800 nt10.48□□□□□ -0.73
VPS3P23643 RAD23YEL037C 1197 nt10.47□□□□□ -0.73
VPS3P23643 HIP1YGR191W 1812 nt10.47□□□□□ -0.73
VPS3P23643 PEX2YJL210W 816 nt10.45□□□□□ -0.74
VPS3P23643 PRO1YDR300C 1287 nt10.44□□□□□ -0.74
VPS3P23643 SAM1YLR180W 1149 nt10.44□□□□□ -0.74
VPS3P23643 TSC10YBR265W 963 nt10.44□□□□□ -0.74
VPS3P23643 NRT1YOR071C 1797 nt10.44□□□□□ -0.74
VPS3P23643 FUR4YBR021W 1902 nt10.43□□□□□ -0.74
VPS3P23643 MET28YIR017C 564 nt10.41□□□□□ -0.74
VPS3P23643 ATG15YCR068W 1563 nt10.4□□□□□ -0.74
VPS3P23643 ARP6YLR085C 1317 nt10.4□□□□□ -0.74
VPS3P23643 TIF6YPR016C 738 nt10.39□□□□□ -0.75
VPS3P23643 RTN2YDL204W 1182 nt10.37□□□□□ -0.75
VPS3P23643 YGR012WYGR012W 1182 nt10.37□□□□□ -0.75
VPS3P23643 RIB3YDR487C 627 nt10.34□□□□□ -0.75
VPS3P23643 YLR437C-AYLR437C-A 228 nt10.34□□□□□ -0.75
VPS3P23643 AAC1YMR056C 930 nt10.34□□□□□ -0.75
VPS3P23643 FIT3YOR383C 615 nt10.34□□□□□ -0.75
VPS3P23643 PRP4YPR178W 1398 nt10.34□□□□□ -0.75
VPS3P23643 GAP1YKR039W 1809 nt10.33□□□□□ -0.76
VPS3P23643 NAR1YNL240C 1476 nt10.3□□□□□ -0.76
VPS3P23643 YLR279WYLR279W 390 nt10.3□□□□□ -0.76
VPS3P23643 DPS1YLL018C 1674 nt10.27□□□□□ -0.77
VPS3P23643 PLB1YMR008C 1995 nt10.26□□□□□ -0.77
VPS3P23643 CAB5YDR196C 726 nt10.25□□□□□ -0.77
VPS3P23643 BMT6YLR063W 1098 nt10.25□□□□□ -0.77
VPS3P23643 YPL222C-AYPL222C-A 246 nt10.24□□□□□ -0.77
VPS3P23643 MSB4YOL112W 1479 nt10.22□□□□□ -0.77
VPS3P23643 YGR259CYGR259C 441 nt10.21□□□□□ -0.77
VPS3P23643 YKR005CYKR005C 1578 nt10.21□□□□□ -0.78
VPS3P23643 YAR028WYAR028W 705 nt10.18□□□□□ -0.78
VPS3P23643 DIF1YLR437C 402 nt10.18□□□□□ -0.78
VPS3P23643 ALP1YNL270C 1722 nt10.17□□□□□ -0.78
VPS3P23643 UTR1YJR049C 1593 nt10.14□□□□□ -0.79
VPS3P23643 BIO5YNR056C 1686 nt10.13□□□□□ -0.79
VPS3P23643 YPI1YFR003C 468 nt10.13□□□□□ -0.79
VPS3P23643 FUN14YAL008W 597 nt10.12□□□□□ -0.79
VPS3P23643 STE4YOR212W 1272 nt10.12□□□□□ -0.79
VPS3P23643 GND1YHR183W 1470 nt10.11□□□□□ -0.79
VPS3P23643 YJL195CYJL195C 702 nt10.11□□□□□ -0.79
VPS3P23643 MTG2YHR168W 1557 nt10.1□□□□□ -0.79
VPS3P23643 SAM35YHR083W 990 nt10.1□□□□□ -0.79
VPS3P23643 AKR2YOR034C 2250 nt10.09□□□□□ -0.79
VPS3P23643 CYT2YKL087C 675 nt10.09□□□□□ -0.79
VPS3P23643 LOT5YKL183W 921 nt10.09□□□□□ -0.79
VPS3P23643 ADH1YOL086C 1047 nt10.09□□□□□ -0.79
VPS3P23643 SNF1YDR477W 1902 nt10.09□□□□□ -0.79
VPS3P23643 RAD51YER095W 1203 nt10.08□□□□□ -0.8
VPS3P23643 ZTA1YBR046C 1005 nt10.08□□□□□ -0.8
VPS3P23643 PBP1YGR178C 2169 nt10.07□□□□□ -0.8
VPS3P23643 YLR349WYLR349W 507 nt10.06□□□□□ -0.8
VPS3P23643 YNR029CYNR029C 1290 nt10.03□□□□□ -0.8
VPS3P23643 IRC24YIR036C 792 nt10.02□□□□□ -0.81
VPS3P23643 FRE6YLL051C 2139 nt10.01□□□□□ -0.81
VPS3P23643 FCY21YER060W 1587 nt10.01□□□□□ -0.81
VPS3P23643 CMP2YML057W 1815 nt10.01□□□□□ -0.81
VPS3P23643 APT2YDR441C 546 nt10.01□□□□□ -0.81
VPS3P23643 SED1YDR077W 1017 nt10□□□□□ -0.81
VPS3P23643 SMM1YNR015W 1155 nt10□□□□□ -0.81
VPS3P23643 ADH7YCR105W 1086 nt9.98□□□□□ -0.81
VPS3P23643 YEL008WYEL008W 381 nt9.98□□□□□ -0.81
VPS3P23643 PRM5YIL117C 957 nt9.98□□□□□ -0.81
VPS3P23643 LSB3YFR024C-A 1380 nt9.95□□□□□ -0.82
VPS3P23643 PAU15YIR041W 375 nt9.94□□□□□ -0.82
VPS3P23643 LIP1YMR298W 453 nt9.93□□□□□ -0.82
VPS3P23643 YER190C-AYER190C-A 576 nt9.92□□□□□ -0.82
VPS3P23643 YGR296C-AYGR296C-A 576 nt9.92□□□□□ -0.82
VPS3P23643 YML133W-AYML133W-A 576 nt9.92□□□□□ -0.82
VPS3P23643 YNL339W-AYNL339W-A 576 nt9.92□□□□□ -0.82
VPS3P23643 YPL283W-AYPL283W-A 576 nt9.92□□□□□ -0.82
VPS3P23643 PRY1YJL079C 900 nt9.9□□□□□ -0.82
VPS3P23643 HSL7YBR133C 2484 nt9.89□□□□□ -0.83
VPS3P23643 CPD1YGR247W 720 nt9.89□□□□□ -0.83
VPS3P23643 HXT12YIL170W 1374 nt9.88□□□□□ -0.83
VPS3P23643 ALD4YOR374W 1560 nt9.88□□□□□ -0.83
VPS3P23643 DBP1YPL119C 1854 nt9.88□□□□□ -0.83
VPS3P23643 GPN2YOR262W 1044 nt9.88□□□□□ -0.83
VPS3P23643 RIB2YOL066C 1776 nt9.88□□□□□ -0.83
VPS3P23643 UGA4YDL210W 1716 nt9.87□□□□□ -0.83
VPS3P23643 HXT1YHR094C 1713 nt9.85□□□□□ -0.83
VPS3P23643 VRG4YGL225W 1014 nt9.84□□□□□ -0.83
VPS3P23643 SSN3YPL042C 1668 nt9.83□□□□□ -0.84
VPS3P23643 YPL251WYPL251W 303 nt9.82□□□□□ -0.84
VPS3P23643 LEU9YOR108W 1815 nt9.82□□□□□ -0.84
VPS3P23643 YBL086CYBL086C 1401 nt9.82□□□□□ -0.84
VPS3P23643 BRR1YPR057W 1026 nt9.8□□□□□ -0.84
VPS3P23643 MEP3YPR138C 1470 nt9.79□□□□□ -0.84
VPS3P23643 ESS1YJR017C 513 nt9.78□□□□□ -0.84
Retrieved 100 of 7,029 protein–RNA pairs in 64.9 ms