Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TMEM56-RWDD3S4R434 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TMEM56-RWDD3S4R434 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 ATP5G2P3-201ENST00000429083 425 ntBASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 AC137630.3-201ENST00000607245 391 ntBASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM56-RWDD3S4R434 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.42
TMEM56-RWDD3S4R434 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.71■□□□□ 0.42
TMEM56-RWDD3S4R434 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 AC004987.1-201ENST00000428627 508 ntBASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM56-RWDD3S4R434 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM56-RWDD3S4R434 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM56-RWDD3S4R434 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM56-RWDD3S4R434 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM56-RWDD3S4R434 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM56-RWDD3S4R434 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM56-RWDD3S4R434 ABHD17AP5-201ENST00000580133 923 ntBASIC17.69■□□□□ 0.42
TMEM56-RWDD3S4R434 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TMEM56-RWDD3S4R434 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.69■□□□□ 0.42
TMEM56-RWDD3S4R434 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM56-RWDD3S4R434 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TMEM56-RWDD3S4R434 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TMEM56-RWDD3S4R434 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM56-RWDD3S4R434 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM56-RWDD3S4R434 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM56-RWDD3S4R434 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TMEM56-RWDD3S4R434 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM56-RWDD3S4R434 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM56-RWDD3S4R434 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM56-RWDD3S4R434 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM56-RWDD3S4R434 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM56-RWDD3S4R434 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM56-RWDD3S4R434 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM56-RWDD3S4R434 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM56-RWDD3S4R434 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM56-RWDD3S4R434 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM56-RWDD3S4R434 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM56-RWDD3S4R434 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 AF106564.1-201ENST00000607058 2553 ntBASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM56-RWDD3S4R434 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM56-RWDD3S4R434 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM56-RWDD3S4R434 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM56-RWDD3S4R434 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM56-RWDD3S4R434 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM56-RWDD3S4R434 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM56-RWDD3S4R434 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM56-RWDD3S4R434 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms